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PLM4_65_coex_sep16_scaffold_9139

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_9139_1
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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comp(3..1286)
DNA (1284bp) protein (428aa)
Putative phytochrome sensor protein bin=GWF2_Nitrospirae_44_13 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
putative phytochrome sensor protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM4_65_coex_sep16_scaffold_9139_2
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(1504..1878)
DNA (375bp) protein (125aa)
Response regulator bin=GWF2_Lentisphaerae_57_35 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Tax=GWF2_Lentisphaerae_57_35_curated
PLM4_65_coex_sep16_scaffold_9139_3
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(1893..2384)
DNA (492bp) protein (164aa)
Hydrogenase maturation protease bin=GWF2_Lentisphaerae_57_35 species=Methylocella silvestris genus=Methylocella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Ni,Fe-hydrogenase maturation factor
Tax=GWF2_Lentisphaerae_57_35_curated
PLM4_65_coex_sep16_scaffold_9139_4
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2374..3837)
DNA (1464bp) protein (488aa)
Coenzyme F420-reducing hydrogenase, alpha subunit bin=GWF2_Lentisphaerae_57_35 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
coenzyme F420-reducing hydrogenase subunit alpha
Tax=GWF2_Lentisphaerae_57_35_curated
PLM4_65_coex_sep16_scaffold_9139_5
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(3854..4399)
DNA (546bp) protein (182aa)
Coenzyme F420-reducing hydrogenase, gamma subunit bin=GWF2_Lentisphaerae_57_35 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
coenzyme F420-reducing hydrogenase subunit gamma
Tax=GWF2_Lentisphaerae_57_35_curated
PLM4_65_coex_sep16_scaffold_9139_6
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(4417..5139)
DNA (723bp) protein (241aa)
Probable hydrogen dehydrogenase bin=GWC2_Planctomycetes_45_44 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
hydrogen dehydrogenase
Tax=GWC2_Planctomycetes_45_44_curated
PLM4_65_coex_sep16_scaffold_9139_7
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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comp(5156..5437)
DNA (282bp) protein (94aa)
NAD-reducing hydrogenase subunit alpha (EC:1.12.1.2)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit bin=GWF2_Lentisphaerae_57_35 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
PLM4_65_coex_sep16_scaffold_9139_8
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(5437..6162)
DNA (726bp) protein (242aa)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit bin=GWF2_Planctomycete_41_51 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
nuoF; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
Tax=GWF2_Planctomycetes_41_51_curated
PLM4_65_coex_sep16_scaffold_9139_9
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(6159..6944)
DNA (786bp) protein (262aa)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit bin=GWF2_Lentisphaerae_57_35 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
nuoF; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
Tax=GWF2_Lentisphaerae_57_35_curated
PLM4_65_coex_sep16_scaffold_9139_10
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(7179..8234)
DNA (1056bp) protein (352aa)
Hydrogenase maturation protein, carbamoyl dehydratase HypE bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
hydrogenase expression/formation protein HypE
Tax=CSP1_3_Armatimonadetes
PLM4_65_coex_sep16_scaffold_9139_11
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(8238..8687)
DNA (450bp) protein (150aa)
hydrogenase expression/formation protein HypD; K04654 hydrogenase expression/formation protein HypD bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin9_gal15 organism_group=GAL15
hydrogenase expression/formation protein HypD
Tax=RBG_16_KB1_OP1_55_9_curated
Displaying 11 items

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