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PLM4_65_coex_sep16_scaffold_3568

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_3568_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3..173)
DNA (171bp) protein (57aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase Tax=Propionibacterium sp. oral taxon 192 str. F0372 RepID=S3X4E1_9ACTO
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3568_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(370..1419)
DNA (1050bp) protein (350aa)
id=14429334 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM4_65_coex_sep16_scaffold_3568_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(1646..3007)
DNA (1362bp) protein (454aa)
cation diffusion facilitator family transporter bin=RBG_16_Aminicenantes_63_14 tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
cation diffusion facilitator family transporter
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3568_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3004..3627)
DNA (624bp) protein (208aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3568_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3624..4328)
DNA (705bp) protein (235aa)
HAD family hydrolase bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
HAD family hydrolase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3568_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(4381..5760)
DNA (1380bp) protein (460aa)
sigma-54 dependent DNA-binding response regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3568_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(5859..8087)
DNA (2229bp) protein (743aa)
multi-sensor signal transduction histidine kinase; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] bin=bin3_NC10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
multi-sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3568_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(8352..9203)
DNA (852bp) protein (284aa)
lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKY4_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3568_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(9507..9989)
DNA (483bp) protein (161aa)
hypothetical protein bin=bin3_NC10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3568_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(9986..10624)
DNA (639bp) protein (213aa)
rnhA; ribonuclease h (EC:3.1.26.4)
Putative SAM-dependent methyltransferase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PQ68_9FIRM
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3568_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(10629..11384)
DNA (756bp) protein (252aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3568_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

11562..12554
DNA (993bp) protein (331aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DN66_DESRL
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 12 items

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