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PLM4_65_coex_sep16_scaffold_538

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_538_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..339)
DNA (339bp) protein (113aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAR0_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25332.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_538_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(336..1061)
DNA (726bp) protein (242aa)
ABC transporter related protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAR1_GEOUR
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ABQ25333.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_538_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1062..2279)
DNA (1218bp) protein (406aa)
Efflux transporter, RND family, MFP subunit Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAR2_GEOUR
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABQ25334.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_538_4
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2829..3014
DNA (186bp) protein (62aa)
Uncharacterized protein bin=GWD2_Desulfuromonadales_54_10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM4_65_coex_sep16_scaffold_538_5
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3174..3536
DNA (363bp) protein (121aa)
Uncharacterized protein bin=GWB2_Pelobacter_53_15 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM4_65_coex_sep16_scaffold_538_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3743..4129
DNA (387bp) protein (129aa)
Response regulator receiver protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBW5_GEOUR
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABQ24932.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_538_7
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4158..6044)
DNA (1887bp) protein (629aa)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ABK98533.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABK98533.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
PAS/PAC sensor hybrid histidine kinase Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AMG3_PELPD
PAS/PAC sensor hybrid histidine kinase
PLM4_65_coex_sep16_scaffold_538_8
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6403..7854
DNA (1452bp) protein (484aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
Sensor histidine kinase, HAMP domain-containing Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q747Z6_GEOSL
sensor histidine kinase, HAMP domain-containing
PLM4_65_coex_sep16_scaffold_538_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7851..8531
DNA (681bp) protein (227aa)
Two component transcriptional regulator, winged helix family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6N1_GEOUR
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABQ27449.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_538_10
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8927..9118
DNA (192bp) protein (64aa)
Uncharacterized protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M027_GEODF
Uncharacterized protein {ECO:0000313|EMBL:GAM10299.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_538_11
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9366..10235
DNA (870bp) protein (290aa)
nitrogenase iron protein 2 (EC:1.18.6.1)
Nitrogenase iron protein 2 (Nitrogenase component II)(Nitrogenase Fe protein 2) (Nitrogenase reductase) Tax=Treponema azotonutricium RepID=F5YCN2_TREAZ
Nitrogenase iron protein 2 {ECO:0000313|EMBL:GAM10298.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
PLM4_65_coex_sep16_scaffold_538_12
Acinetobacter bouvetii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10680..12080
DNA (1401bp) protein (467aa)
Uncharacterized protein Tax=Acinetobacter bouvetii DSM 14964 = CIP 107468 RepID=N9DM35_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENV81800.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter bouvetii DSM 14964 = CIP 107468.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_538_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12158..13216
DNA (1059bp) protein (353aa)
nitrate ABC transporter substrate-binding protein Tax=Herbaspirillum lusitanum RepID=UPI0002D49862
nitrate ABC transporter substrate-binding protein
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:AGP34628.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM4_65_coex_sep16_scaffold_538_14
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13330..14106
DNA (777bp) protein (259aa)
Binding-protein-dependent transport systems inner membrane component Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8B5_GEOUR
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABQ28033.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_538_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14133..14894
DNA (762bp) protein (254aa)
Binding-protein-dependent transport systems inner membrane component Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8B4_GEOUR
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABQ28032.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_538_16
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14917..15702
DNA (786bp) protein (262aa)
ABC transporter related protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8B3_GEOUR
ABC transporter-like protein
Aliphatic sulfonates import ATP-binding protein SsuB {ECO:0000313|EMBL:GAM10289.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
PLM4_65_coex_sep16_scaffold_538_17
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15733..16719
DNA (987bp) protein (329aa)
Extracellular solute-binding protein family 3 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0STR4_SYNGF
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ADY55354.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
PLM4_65_coex_sep16_scaffold_538_18
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16868..18262
DNA (1395bp) protein (465aa)
2-hydroxyglutaryl-CoA dehydratase D-component Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0STR3_SYNGF
2-hydroxyglutaryl-CoA dehydratase subunit D
2-hydroxyglutaryl-CoA dehydratase D-component {ECO:0000313|EMBL:ADY55353.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
PLM4_65_coex_sep16_scaffold_538_19
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18293..19267
DNA (975bp) protein (325aa)
Extracellular solute-binding protein family 3 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0STR4_SYNGF
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ADY55354.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
PLM4_65_coex_sep16_scaffold_538_20
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19530..19958
DNA (429bp) protein (143aa)
Haloacid dehalogenase domain protein hydrolase Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ATX6_PELPD
hydrolase
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:ABL00797.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
PLM4_65_coex_sep16_scaffold_538_21
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20092..20910
DNA (819bp) protein (273aa)
CoA-substrate-specific enzyme activase Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GH86_METPE
CoA-substrate-specific enzyme activase
CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:ACL16491.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c).;"
PLM4_65_coex_sep16_scaffold_538_22
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20912..22111
DNA (1200bp) protein (400aa)
2-hydroxyglutaryl-CoA dehydratase D-component Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GH85_METPE
2-hydroxyglutaryl-CoA dehydratase subunit D
2-hydroxyglutaryl-CoA dehydratase D-component {ECO:0000313|EMBL:ACL16490.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c).;"
PLM4_65_coex_sep16_scaffold_538_23
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22086..23540
DNA (1455bp) protein (485aa)
2-hydroxyglutaryl-CoA dehydratase D-component Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0STR3_SYNGF
2-hydroxyglutaryl-CoA dehydratase subunit D
2-hydroxyglutaryl-CoA dehydratase D-component {ECO:0000313|EMBL:ADY55353.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
PLM4_65_coex_sep16_scaffold_538_24
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23763..24743
DNA (981bp) protein (327aa)
Extracellular solute-binding protein family 3 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0STR4_SYNGF
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ADY55354.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
PLM4_65_coex_sep16_scaffold_538_25
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25165..26091
DNA (927bp) protein (309aa)
taurine-transporting AtPase (EC:3.6.3.36)
Taurine-transporting ATPase {ECO:0000313|EMBL:ADY55349.1}; EC=3.6.3.36 {ECO:0000313|EMBL:ADY55349.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
Taurine-transporting ATPase Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0STQ9_SYNGF
PLM4_65_coex_sep16_scaffold_538_26
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26088..26852
DNA (765bp) protein (255aa)
Binding-protein-dependent transport systems inner membrane component Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0STR0_SYNGF
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADY55350.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
PLM4_65_coex_sep16_scaffold_538_27
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26963..27784
DNA (822bp) protein (274aa)
CoA-substrate-specific enzyme activase (EC:1.3.7.8)
CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:ADY55351.1}; EC=1.3.7.8 {ECO:0000313|EMBL:ADY55351.1};; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
CoA-substrate-specific enzyme activase Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0STR1_SYNGF
PLM4_65_coex_sep16_scaffold_538_28
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27762..28946
DNA (1185bp) protein (395aa)
2-hydroxyglutaryl-CoA dehydratase D-component Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0STR2_SYNGF
2-hydroxyglutaryl-CoA dehydratase subunit D
2-hydroxyglutaryl-CoA dehydratase D-component {ECO:0000313|EMBL:ADY55352.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
PLM4_65_coex_sep16_scaffold_538_29
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28972..30369
DNA (1398bp) protein (466aa)
2-hydroxyglutaryl-CoA dehydratase D-component Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0STR3_SYNGF
2-hydroxyglutaryl-CoA dehydratase subunit D
2-hydroxyglutaryl-CoA dehydratase D-component {ECO:0000313|EMBL:ADY55353.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
PLM4_65_coex_sep16_scaffold_538_30
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30465..31823
DNA (1359bp) protein (453aa)
Membrane protein, major facilitator superfamily Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EHN3_GEOBB
MFS transporter
MFS transporter {ECO:0000313|EMBL:AJE02778.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
Displaying items 1-30 of 49 in total

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