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PLM4_65_coex_sep16_scaffold_574

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_574_1
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..1061
DNA (1059bp) protein (353aa)
Iron-containing alcohol dehydrogenase bin=GWF2_Geobacter_54_21 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
iron-containing alcohol dehydrogenase
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM4_65_coex_sep16_scaffold_574_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1081..2811
DNA (1731bp) protein (577aa)
Aldehyde ferredoxin oxidoreductase {ECO:0000313|EMBL:ABQ25399.1}; EC=1.2.7.5 {ECO:0000313|EMBL:ABQ25399.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
aldehyde ferredoxin oxidoreductase (EC:1.2.7.5)
Aldehyde ferredoxin oxidoreductase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAJ1_GEOUR
PLM4_65_coex_sep16_scaffold_574_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2951..3175
DNA (225bp) protein (75aa)
ThiamineS protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAJ0_GEOUR
sulfur transfer protein ThiS
ThiamineS protein {ECO:0000313|EMBL:ABQ25398.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_574_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3206..4030
DNA (825bp) protein (275aa)
UBA/THIF-type NAD/FAD binding protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAI9_GEOUR
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ABQ25397.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_574_5
unknown

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comp(4115..4468)
DNA (354bp) protein (118aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_574_6
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4573..4770)
DNA (198bp) protein (66aa)
hypothetical protein bin=GWB2_Geobacter-like_52_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB2_Geobacteraceae_52_12_curated
PLM4_65_coex_sep16_scaffold_574_7
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5244..7235
DNA (1992bp) protein (664aa)
GAF modulated sigma54 specific transcriptional regulator, Fis family bin=GWB2_Pelobacter_53_15 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
GAF modulated Fis family transcriptional regulator
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM4_65_coex_sep16_scaffold_574_8
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7802..13015
DNA (5214bp) protein (1738aa)
Cytochrome C family protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3Q4_GEODF
Cytochrome c, 37 heme-binding sites {ECO:0000313|EMBL:ACM21475.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
cytochrome C family protein
PLM4_65_coex_sep16_scaffold_574_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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13009..20694
DNA (7686bp) protein (2562aa)
Fibronectin, type III domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDY1_GEOUR
Fibronectin, type III domain protein {ECO:0000313|EMBL:ABQ26226.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
fibronectin I domain-containing protein
PLM4_65_coex_sep16_scaffold_574_10
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20936..22132)
DNA (1197bp) protein (399aa)
DNA polymerase IV Tax=Bacteria RepID=B5EA66_GEOBB
DNA polymerase IV subunit kappa
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_574_11
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(22165..22413)
DNA (249bp) protein (83aa)
Putative uncharacterized protein bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_574_12
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(22417..23028)
DNA (612bp) protein (204aa)
LexA repressor Tax=Geobacter sp. (strain M18) RepID=E8WSX9_GEOS8
LexA family transcriptional repressor
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_574_13
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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23194..23562
DNA (369bp) protein (123aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
6-carboxy-5,6,7,8-tetrahydropterin synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3E1_GEOUR
putative 6-pyruvoyl tetrahydropterin synthase
PLM4_65_coex_sep16_scaffold_574_14
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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23576..24307
DNA (732bp) protein (244aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
7-carboxy-7-deazaguanine synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3E2_GEOUR
radical SAM domain-containing protein
PLM4_65_coex_sep16_scaffold_574_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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24318..25037
DNA (720bp) protein (240aa)
Creatininase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3E3_GEOUR
creatininase
Creatininase {ECO:0000313|EMBL:ABQ26311.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying 15 items

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