ggKbase home page

PLM4_65_coex_sep16_scaffold_1176

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1176_1
unknown

Not on your lists

comp(2..109)
DNA (108bp) protein (36aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1176_2
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125..1207)
DNA (1083bp) protein (361aa)
Uncharacterized protein bin=GWC2_Proteo_65_14_Ab886 species=Coxiella burnetii genus=Coxiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWC2_Deltaproteobacteria_65_14_curated
PLM4_65_coex_sep16_scaffold_1176_3
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1204..2256)
DNA (1053bp) protein (351aa)
ADP-heptose--lipopolysaccharide heptosyltransferase Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EEX8_GEOBB
lipopolysaccharide heptosyltransferase
ADP-heptose--lipopolysaccharide heptosyltransferase {ECO:0000313|EMBL:ACH37874.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
PLM4_65_coex_sep16_scaffold_1176_4
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2253..3374)
DNA (1122bp) protein (374aa)
ADP-heptose--lipopolysaccharide heptosyltransferase Tax=Geobacter sulfurreducens RepID=D7AM77_GEOSK
ADP-heptose--LPS heptosyltransferase {ECO:0000313|EMBL:AJY68488.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
ADP-heptose--lipopolysaccharide heptosyltransferase
PLM4_65_coex_sep16_scaffold_1176_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3395..3565)
DNA (171bp) protein (57aa)
UPF0434 protein Gura_3227 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6H0_GEOUR
hypothetical protein
UPF0434 protein Gura_3227 {ECO:0000256|HAMAP-Rule:MF_01187}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1176_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3578..4657)
DNA (1080bp) protein (360aa)
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase {ECO:0000255|HAMAP-Rule:MF_00409}; EC=2.7.1.130 {ECO:0000255|HAMAP-Rule:MF_00409};; Lipid A 4'-kinase {ECO:0000255|HAMAP-Rule:MF_00409}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Tetraacyldisaccharide 4'-kinase Tax=Geobacter uraniireducens (strain Rf4) RepID=LPXK_GEOUR
PLM4_65_coex_sep16_scaffold_1176_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4727..6025)
DNA (1299bp) protein (433aa)
Three-deoxy-D-manno-octulosonic-acid transferase domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6H2_GEOUR
3-deoxy-D-manno-octulosonic-acid transferase
Three-deoxy-D-manno-octulosonic-acid transferase domain protein {ECO:0000313|EMBL:ABQ27390.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1176_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6022..6963)
DNA (942bp) protein (314aa)
Lipid A biosynthesis acyltransferase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6H3_GEOUR
lipid A biosynthesis acyltransferase
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:ABQ27391.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1176_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6978..8723)
DNA (1746bp) protein (582aa)
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6H4_GEOUR
lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA {ECO:0000313|EMBL:ABQ27392.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1176_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8710..9879)
DNA (1170bp) protein (390aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Lipid-A-disaccharide synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6H5_GEOUR
PLM4_65_coex_sep16_scaffold_1176_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10010..10786)
DNA (777bp) protein (259aa)
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387};; EC=2.3.1.129 {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00001267};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6H6_GEOUR
PLM4_65_coex_sep16_scaffold_1176_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10802..11236)
DNA (435bp) protein (145aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000255|HAMAP-Rule:MF_00406}; EC=4.2.1.59 {ECO:0000255|HAMAP-Rule:MF_00406};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000255|HAMAP-Rule:MF_00406}; Short=(3R)-hydroxymyristoyl-ACP dehydrase {ECO:0000255|HAMAP-Rule:MF_00406};; Beta-hydroxyacyl-ACP dehydratase {ECO:0000255|HAMAP-Rule:MF_00406}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Tax=Geobacter uraniireducens RepID=FABZ_GEOUR
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase
PLM4_65_coex_sep16_scaffold_1176_13
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11341..12384)
DNA (1044bp) protein (348aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
UDP-3-O-acylglucosamine N-acyltransferase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6H8_GEOUR
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
PLM4_65_coex_sep16_scaffold_1176_14
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12477..13001)
DNA (525bp) protein (175aa)
Outer membrane chaperone Skp (OmpH) Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6H9_GEOUR
outer membrane chaperone Skp
Outer membrane chaperone Skp (OmpH) {ECO:0000313|EMBL:ABQ27397.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1176_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13024..15342)
DNA (2319bp) protein (773aa)
Outer membrane protein assembly factor BamA Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6I0_GEOUR
surface antigen (D15)
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1176_16
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15480..16154)
DNA (675bp) protein (225aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
ABC transporter related protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6I1_GEOUR
ABC transporter-like protein
PLM4_65_coex_sep16_scaffold_1176_17
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16147..17280)
DNA (1134bp) protein (378aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6I2_GEOUR
LolC/E family lipoprotein releasing system, transmembrane protein
Lipoprotein releasing system, transmembrane protein, LolC/E family {ECO:0000313|EMBL:ABQ27400.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying 17 items

View Taxonomy