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PLM4_65_coex_sep16_scaffold_5105

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_5105_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..690
DNA (690bp) protein (230aa)
Xylose isomerase domain protein TIM barrel Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GB64_GEOUR
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ABQ25181.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5105_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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806..1630
DNA (825bp) protein (275aa)
Polysaccharide deacetylase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GB65_GEOUR
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ABQ25182.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5105_3
unknown

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comp(1936..2139)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_5105_4
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2136..3659)
DNA (1524bp) protein (508aa)
Drug resistance transporter, EmrB/QacA subfamily Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAL7_GEOUR
EmrB/QacA family drug resistance transporter
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_5105_5
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3773..4801)
DNA (1029bp) protein (343aa)
Secretion protein HlyD family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAL8_GEOUR
secretion protein HlyD family protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_5105_6
unknown

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comp(4888..5076)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_5105_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5188..6195)
DNA (1008bp) protein (336aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit bin=GWB2_Pelobacter_53_15 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ABQ25388.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5105_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6249..7247)
DNA (999bp) protein (333aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAK1_GEOUR
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ABQ25389.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5105_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7384..8154)
DNA (771bp) protein (257aa)
Binding-protein-dependent transport systems inner membrane component Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAK2_GEOUR
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABQ25390.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5105_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8147..9100)
DNA (954bp) protein (318aa)
Binding-protein-dependent transport systems inner membrane component Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAK3_GEOUR
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABQ25391.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5105_11
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(9123..9527)
DNA (405bp) protein (135aa)
fosmidomycin resistance protein Tax=Desulfospira joergensenii RepID=UPI0003B63B19
Glyoxalase-like domain containing protein
Glyoxalase-like domain containing protein {ECO:0000313|EMBL:AJQ28586.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
PLM4_65_coex_sep16_scaffold_5105_12
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9699..10406)
DNA (708bp) protein (236aa)
Ferredoxin and NADH nitroreductase domain protein Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74FS8_GEOSL
Nitroreductase {ECO:0000313|EMBL:KIE41228.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
ferredoxin and NADH nitroreductase domain-containing protein
PLM4_65_coex_sep16_scaffold_5105_13
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10414..11970)
DNA (1557bp) protein (519aa)
4-phytase (EC:3.1.3.26)
4-phytase {ECO:0000313|EMBL:ABQ25393.1}; EC=3.1.3.26 {ECO:0000313|EMBL:ABQ25393.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
4-phytase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAK5_GEOUR
PLM4_65_coex_sep16_scaffold_5105_14
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12009..12593)
DNA (585bp) protein (195aa)
Transcriptional regulator, TetR family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAK6_GEOUR
TetR family transcriptional regulator
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_5105_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12893..13159)
DNA (267bp) protein (89aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Pyrroline-5-carboxylate reductase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GB68_GEOUR
Displaying 15 items

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