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PLM4_65_coex_sep16_scaffold_5264

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_5264_1
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..210)
DNA (210bp) protein (70aa)
Uncharacterized protein Tax=Geobacter metallireducens RepID=Q39RV4_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB33020.2}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_5264_2
CG_Nitrosp_02, Nitrospirae, Bacteria

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366..992
DNA (627bp) protein (209aa)
Integrase domain protein Tax=Geobacter sulfurreducens RepID=D7AK64_GEOSK
integrase domain-containing protein
Tax=CG_Nitrosp_02
PLM4_65_coex_sep16_scaffold_5264_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1542..2900
DNA (1359bp) protein (453aa)
Radical SAM domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA95_GEOUR
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ABQ25503.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5264_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3462..3731)
DNA (270bp) protein (90aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA96_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25504.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5264_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4290..5060
DNA (771bp) protein (257aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5X0_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ27188.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5264_6
RBG_13_Spirochaetes_51_14_curated, Spirochaetes, Bacteria

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5090..5386
DNA (297bp) protein (99aa)
Conserved carbohydrate-binding protein, Rhs family bin=GWC2_Nitrospirae_57_13 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
sugar-binding protein
Tax=RBG_13_Spirochaetes_51_14_curated
PLM4_65_coex_sep16_scaffold_5264_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5287..5679)
DNA (393bp) protein (131aa)
Acylphosphatase; EC=3.6.1.7;; Acylphosphate phosphohydrolase; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Acylphosphatase Tax=Geobacter uraniireducens (strain Rf4) RepID=ACYP_GEOUR
acylphosphatase
PLM4_65_coex_sep16_scaffold_5264_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5680..7692)
DNA (2013bp) protein (671aa)
DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000255|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000255|HAMAP-Rule:MF_01588}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase Tax=Geobacter uraniireducens (strain Rf4) RepID=DNLJ_GEOUR
PLM4_65_coex_sep16_scaffold_5264_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7984..8247
DNA (264bp) protein (88aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7K6_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ27774.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5264_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8299..10242)
DNA (1944bp) protein (648aa)
Response regulator receiver protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7K5_GEOUR
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABQ27773.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5264_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10211..11293)
DNA (1083bp) protein (361aa)
Aminodeoxychorismate lyase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7K4_GEOUR
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:ABQ27772.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5264_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11409..12302)
DNA (894bp) protein (298aa)
Polysaccharide deacetylase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7T4_GEOUR
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ABQ27852.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5264_13
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12413..12958)
DNA (546bp) protein (182aa)
UDP-glucuronate 4-dehydrogenase, decarboxylating Tax=Geobacter metallireducens RepID=Q39X99_GEOMG
arnA; NAD-dependent epimerase/dehydratase family protein
UDP-glucuronate 4-dehydrogenase, decarboxylating {ECO:0000313|EMBL:ABB31125.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
Displaying 13 items

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