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PLM4_65_coex_sep16_scaffold_9655

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_9655_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..169)
DNA (168bp) protein (56aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Ribonuclease E Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAD1_GEOUR
ribonuclease
PLM4_65_coex_sep16_scaffold_9655_2

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comp(726..1640)
DNA (915bp) protein (305aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM05756.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Diguanylate cyclase (GGDEF) domain-containing protein bin=GWA2_Planctomycetia_40_7 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
response regulator receiver modulated diguanylate cyclase/phosphodiesterase
PLM4_65_coex_sep16_scaffold_9655_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1645..2091)
DNA (447bp) protein (149aa)
Two-component system response regulator Tax=Cystobacter fuscus DSM 2262 RepID=S9PAV0_9DELT
response regulator receiver
Tax=RBG_16_Gamma2_65_34_curated
PLM4_65_coex_sep16_scaffold_9655_4
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

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comp(2097..3767)
DNA (1671bp) protein (557aa)
Sensory transduction histidine kinase Tax=uncultured archaeon GZfos26B2 RepID=Q64C59_9ARCH
PAS sensor protein
Tax=GWC2_Nitrospirae_57_9_curated
PLM4_65_coex_sep16_scaffold_9655_5
RifOxyA12_full_Desulfobacula_46_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3770..4705)
DNA (936bp) protein (312aa)
ABC-type phosphate transport system, periplasmic component Tax=Synechocystis sp. PCC 7509 RepID=L8KX04_9SYNC
hypothetical protein
Tax=RifOxyA12_full_Desulfobacula_46_16_curated
PLM4_65_coex_sep16_scaffold_9655_6
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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5333..6139
DNA (807bp) protein (269aa)
Putative redox-active protein (C_GCAxxG_C_C) Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4AAR0_DESDJ
redox-active protein
Tax=GWB2_Chloroflexi_54_36_curated
PLM4_65_coex_sep16_scaffold_9655_7
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6421..7032
DNA (612bp) protein (204aa)
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:GAM07907.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
id=3110466 bin=GWF2_Geobacter_54_21 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
PLM4_65_coex_sep16_scaffold_9655_8
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7096..8028
DNA (933bp) protein (311aa)
Carbamate kinase Tax=Geobacter metallireducens RepID=Q39RX0_GEOMG
cpkA; amino acid kinase
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_9655_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8131..8469
DNA (339bp) protein (113aa)
HNH endonuclease Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAE6_GEOUR
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:ABQ25454.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_9655_10
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8572..8901)
DNA (330bp) protein (110aa)
Group II intron-encoded protein LtrA family protein Tax=delta proteobacterium NaphS2 RepID=D8FCV8_9DELT
DNA polymerase {ECO:0000313|EMBL:KFO67897.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCADC.;"
putative RNA-directed DNA polymerase
PLM4_65_coex_sep16_scaffold_9655_11
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9099..9773)
DNA (675bp) protein (225aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WLX5_GEOS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW11695.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM4_65_coex_sep16_scaffold_9655_12
unknown

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10014..10112
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 12 items

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