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PLM4_65_coex_sep16_scaffold_3929

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_3929_1
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..542
DNA (540bp) protein (180aa)
Uncharacterized protein bin=GWB2_Pelobacter_53_15 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_3929_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(570..1148)
DNA (579bp) protein (193aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCM2_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24676.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3929_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1358..1771)
DNA (414bp) protein (138aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCM1_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24675.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3929_4
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1768..2388)
DNA (621bp) protein (207aa)
Cytochrome b/b6 domain protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M4I0_GEODF
cytochrome b/b6 protein
Menaquinol oxidoreductase complex Cbc6, cytochrome b subunit, putative {ECO:0000313|EMBL:ACM19706.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_3929_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2410..2802)
DNA (393bp) protein (131aa)
Rieske (2Fe-2S) domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCL9_GEOUR
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ABQ24673.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3929_6
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2757..5774)
DNA (3018bp) protein (1006aa)
Uncharacterized protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M4H7_GEODF
hypothetical protein
Menaquinol oxidoreductase complex Cbc6, lipoprotein cytochrome c subunit, putative, 12 heme-binding sites {ECO:0000313|EMBL:ACM19703.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_3929_7
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5924..7315
DNA (1392bp) protein (464aa)
Thiosulfate sulfurtransferase GlpE {ECO:0000313|EMBL:GAM09324.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Rhodanese domain protein bin=GWF2_Syntrophobacterales_56_9 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Rhodanese domain-containing protein
PLM4_65_coex_sep16_scaffold_3929_8
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7342..7689
DNA (348bp) protein (116aa)
Putative uncharacterized protein bin=GWC2_Pelobacter_58_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWC2_Pelobacteraceae_58_13_curated
PLM4_65_coex_sep16_scaffold_3929_9
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7822..9201)
DNA (1380bp) protein (460aa)
Outer membrane channel, putative Tax=Geobacter metallireducens RepID=Q39SD1_GEOMG
outer membrane channel
Outer membrane channel, putative {ECO:0000313|EMBL:ABB32843.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_3929_10
Leptospira interrogans, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(9538..9813)
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Leptospira interrogans RepID=K6GB20_LEPIR
Uncharacterized protein {ECO:0000313|EMBL:EKO23445.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira interrogans str. UI 12621.;"
TolA protein
PLM4_65_coex_sep16_scaffold_3929_11
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9892..10608)
DNA (717bp) protein (239aa)
Tetrathionate reductase subunit B {ECO:0000313|EMBL:GAM09327.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Putative molybdopterin oxidoreductase iron-sulfur binding subunit bin=GWD2_Desulfuromonadales_54_10 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
putative molybdopterin oxidoreductase iron-sulfur binding subunit
PLM4_65_coex_sep16_scaffold_3929_12
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10611..11768)
DNA (1158bp) protein (386aa)
Hdr-like menaquinol oxidoreductase integral membrane subunit {ECO:0000313|EMBL:GAM09328.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Polysulphide reductase NrfD bin=GWB2_Pelobacter_53_15 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
Polysulfide reductase NrfD
PLM4_65_coex_sep16_scaffold_3929_13
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11772..12773)
DNA (1002bp) protein (334aa)
formate dehydrogenase (EC:1.2.1.2); K08352 thiosulfate reductase [EC:1.-.-.-] bin=bin5_DeltaP species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
formate dehydrogenase (EC:1.2.1.2)
Polysulfide reductase chain A {ECO:0000313|EMBL:GAM09329.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Displaying 13 items

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