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PLM4_65_coex_sep16_scaffold_4198

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_4198_1
unknown

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1..84
DNA (84bp) protein (28aa)
riboflavin biosynthesis protein RibD
PLM4_65_coex_sep16_scaffold_4198_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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69..716
DNA (648bp) protein (216aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3K1_GEOUR
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ABQ26369.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_4198_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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800..2002
DNA (1203bp) protein (401aa)
GTP cyclohydrolase II (EC:3.5.4.25)
Riboflavin biosynthesis protein RibBA Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3K0_GEOUR
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_4198_4
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2148..2615
DNA (468bp) protein (156aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000255|HAMAP-Rule:MF_00178}; Short=DMRL synthase {ECO:0000255|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000255|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000255|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000255|HAMAP-Rule:MF_00178};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
6,7-dimethyl-8-ribityllumazine synthase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=RISB_GEODF
PLM4_65_coex_sep16_scaffold_4198_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2615..3052
DNA (438bp) protein (146aa)
N utilization substance protein B homolog Tax=Geobacter uraniireducens (strain Rf4) RepID=NUSB_GEOUR
NusB antitermination factor
N utilization substance protein B homolog {ECO:0000255|HAMAP-Rule:MF_00073}; Short=Protein NusB {ECO:0000255|HAMAP-Rule:MF_00073};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_4198_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3112..4407
DNA (1296bp) protein (432aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Homoserine dehydrogenase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3J7_GEOUR
PLM4_65_coex_sep16_scaffold_4198_7
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4786..10644
DNA (5859bp) protein (1953aa)
Alpha-2-macroglobulin domain protein 2 Tax=Geobacter sp. (strain M18) RepID=E8WIR0_GEOS8
Alpha-2-macroglobulin domain protein 2 {ECO:0000313|EMBL:ADW15741.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
alpha-2-macroglobulin domain-containing protein 2
PLM4_65_coex_sep16_scaffold_4198_8
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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10644..12791
DNA (2148bp) protein (716aa)
penicillin-binding protein 1C (EC:2.4.1.129)
Penicillin-binding protein 1C {ECO:0000313|EMBL:ADW15742.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ADW15742.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
Penicillin-binding protein 1C Tax=Geobacter sp. (strain M18) RepID=E8WIR1_GEOS8
PLM4_65_coex_sep16_scaffold_4198_9
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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12761..12913
DNA (153bp) protein (51aa)
Transcriptional modulator of MazE/toxin, MazF Tax=Geobacter sp. (strain M18) RepID=E8WIQ2_GEOS8
transcriptional modulator of MazE/toxin MazF
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_4198_10
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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12975..13157
DNA (183bp) protein (61aa)
Pseudouridine synthase bin=GWF2_Geobacter_54_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
pseudouridine synthase
Tax=GWC2_Geobacteraceae_58_44_curated
Displaying 10 items

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