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PLM4_65_coex_sep16_scaffold_3041

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_3041_1
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

2..1186
DNA (1185bp) protein (395aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
PLM4_65_coex_sep16_scaffold_3041_2
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

1288..2169
DNA (882bp) protein (294aa)
alias=gwe2_scaffold_696_63 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
PLM4_65_coex_sep16_scaffold_3041_3
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

2319..2672
DNA (354bp) protein (118aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
PLM4_65_coex_sep16_scaffold_3041_4
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists

2815..4305
DNA (1491bp) protein (497aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW48158.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
PLM4_65_coex_sep16_scaffold_3041_5
CG_CPR07_01, CG_CPR07, Bacteria

Not on your lists

comp(4251..4802)
DNA (552bp) protein (184aa)
aminoacyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase Tax=uncultured bacterium RepID=K1XF53_9BACT
Tax=CG_CPR07_01
PLM4_65_coex_sep16_scaffold_3041_6
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

4823..5383
DNA (561bp) protein (187aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
signal peptidase I (EC:3.4.21.89)
Tax=GWB1_OD1_49_6_curated
PLM4_65_coex_sep16_scaffold_3041_7
Parcubacteria bacterium GW2011_GWB1_56_8, Parcubacteria, Bacteria

Not on your lists


5397..6710
DNA (1314bp) protein (438aa)
Histidine--tRNA ligase Tax=uncultured bacterium RepID=K1XTV0_9BACT
Histidine-tRNA ligase {ECO:0000313|EMBL:KKW46842.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_56_8.;"
histidyl-tRNA synthetase
PLM4_65_coex_sep16_scaffold_3041_8
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

6710..7108
DNA (399bp) protein (133aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
histidine triad (HIT) protein
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
PLM4_65_coex_sep16_scaffold_3041_9
GWC2_OD1_48_17, Parcubacteria, Bacteria

Not on your lists

7116..7883
DNA (768bp) protein (256aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU97055.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_48_17.;"
PLM4_65_coex_sep16_scaffold_3041_10
GWB1_OD1_45_9, Parcubacteria, Bacteria

Not on your lists

7929..8141
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU14685.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_45_9.;"
alias=gwe2_scaffold_594_37 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
PLM4_65_coex_sep16_scaffold_3041_11
R_OD1_Wolfebacteria_42_16, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

8141..8584
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SF94_RHOMR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Wolfebacteria_42_16_curated
PLM4_65_coex_sep16_scaffold_3041_12
R_OD1_57_28, Parcubacteria, Bacteria

Not on your lists

8581..9018
DNA (438bp) protein (146aa)
Endoribonuclease YbeY Tax=Bartonella sp. AR 15-3 RepID=E6YPC4_9RHIZ
Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
PLM4_65_coex_sep16_scaffold_3041_13
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

9047..11368
DNA (2322bp) protein (774aa)
Cell division protein FtsZ Tax=uncultured bacterium RepID=K1XF93_9BACT
ftsZ; cell division protein FtsZ
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
PLM4_65_coex_sep16_scaffold_3041_14
unknown

Not on your lists

comp(11566..11964)
DNA (399bp) protein (133aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3041_15
Parcubacteria bacterium GW2011_GWB1_56_8, Parcubacteria, Bacteria

Not on your lists

comp(12005..12535)
DNA (531bp) protein (177aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW46848.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_56_8.;"
Putative DNA recombination protein bin=GWC1_OD1_38_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
PLM4_65_coex_sep16_scaffold_3041_16
GWB1_OD1_41_12, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(12585..13043)
DNA (459bp) protein (153aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR88769.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWB1_41_12.;"
Putative DNA recombination protein bin=GWC1_OD1_38_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
PLM4_65_coex_sep16_scaffold_3041_trna_1
unknown

Not on your lists

comp(13046..13116)
DNA (71bp)
transferRNA Gly
PLM4_65_coex_sep16_scaffold_3041_17
unknown

Not on your lists

comp(13197..13787)
DNA (591bp) protein (197aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3041_18
unknown

Not on your lists

comp(13784..13987)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3041_19
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

14085..15779
DNA (1695bp) protein (565aa)
dnaG; DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
dnaG; DNA primase DnaG (EC:2.7.7.-)
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
PLM4_65_coex_sep16_scaffold_3041_20
R_OD1_57_28, Parcubacteria, Bacteria

Not on your lists

15772..17064
DNA (1293bp) protein (431aa)
RNA polymerase sigma factor Tax=uncultured bacterium RepID=K1X0J6_9BACT
RNA polymerase, sigma 70 subunit, rpod subfamily
Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
PLM4_65_coex_sep16_scaffold_3041_21
unknown

Not on your lists

17117..17521
DNA (405bp) protein (135aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3041_22
unknown

Not on your lists

17565..17933
DNA (369bp) protein (123aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3041_23
GWA1_OD1_49_17_curated, Parcubacteria, Bacteria

Not on your lists


17993..19756
DNA (1764bp) protein (588aa)
Alanine--tRNA ligase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Alanine-tRNA ligase
Tax=GWA1_OD1_49_17_curated
PLM4_65_coex_sep16_scaffold_3041_24
unknown

Not on your lists

19763..20296
DNA (534bp) protein (178aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3041_25
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

20339..21889
DNA (1551bp) protein (517aa)
alias=gwe2_scaffold_594_3 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
PLM4_65_coex_sep16_scaffold_3041_26
R_OD1_53_13, Parcubacteria, Bacteria

Not on your lists

21963..22178
DNA (216bp) protein (72aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000360E515
Translation initiation factor IF-1
Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated
PLM4_65_coex_sep16_scaffold_3041_27
RHI_OD1_Wolfebacteria_48_16, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


22315..22698
DNA (384bp) protein (128aa)
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
30S ribosomal protein S13
Tax=RIFCSPHIGHO2_12_FULL_OD1_Wolfebacteria_48_16_curated
PLM4_65_coex_sep16_scaffold_3041_28
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists


22715..23170
DNA (456bp) protein (152aa)
30S ribosomal protein S11 Tax=uncultured bacterium RepID=K1XF76_9BACT
30S ribosomal protein S11
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
Displaying 29 items

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