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PLM4_65_coex_sep16_scaffold_6128

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_6128_1
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..385)
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Asticcacaulis sp. AC466 RepID=V4PEQ1_9CAUL
Conserved protein {ECO:0000313|EMBL:GAK43687.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_6128_trna_1
unknown

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436..507
DNA (72bp)
transferRNA Val
PLM4_65_coex_sep16_scaffold_6128_2
unknown

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comp(555..980)
DNA (426bp) protein (142aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_6128_3
R_OD1_57_28, Parcubacteria, Bacteria

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comp(1149..1556)
DNA (408bp) protein (136aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003708049
50S ribosomal protein L7/L12
Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
PLM4_65_coex_sep16_scaffold_6128_4
R_OD1_52_25, Parcubacteria, Bacteria

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comp(1525..2187)
DNA (663bp) protein (221aa)
50S ribosomal protein L10 Tax=Parvimonas micra ATCC 33270 RepID=A8SM48_9FIRM bin=ACD81 species=Parvimonas micra genus=Parvimonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
PLM4_65_coex_sep16_scaffold_6128_5
R_OD1_Wolfebacteria_44_18, Wolfebacteria, Parcubacteria, Bacteria

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comp(2358..2654)
DNA (297bp) protein (99aa)
Glycine-rich RNA-binding protein GRP1A bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RNP-1 like RNA-binding protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Wolfebacteria_44_18_curated
PLM4_65_coex_sep16_scaffold_6128_6
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

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comp(2802..3044)
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS04386.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
PLM4_65_coex_sep16_scaffold_6128_trna_4
unknown

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comp(3125..3195)
DNA (71bp)
transferRNA Trp
PLM4_65_coex_sep16_scaffold_6128_trna_3
unknown

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comp(3536..3608)
DNA (73bp)
transferRNA Thr
PLM4_65_coex_sep16_scaffold_6128_trna_2
unknown

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comp(4135..4205)
DNA (71bp)
transferRNA Thr
PLM4_65_coex_sep16_scaffold_6128_7
R_OD1_56_20, Parcubacteria, Bacteria

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4338..7508
DNA (3171bp) protein (1057aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
PLM4_65_coex_sep16_scaffold_6128_8
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

comp(7505..8944)
DNA (1440bp) protein (480aa)
lysS; lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
lysyl-tRNA synthetase (EC:6.1.1.6)
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
PLM4_65_coex_sep16_scaffold_6128_9
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

comp(9035..9490)
DNA (456bp) protein (152aa)
transcription elongation factor GreA; K03624 transcription elongation factor GreA bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
PLM4_65_coex_sep16_scaffold_6128_10
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

comp(9508..10434)
DNA (927bp) protein (309aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037A57C8
glycosyltransferase
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
PLM4_65_coex_sep16_scaffold_6128_11
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

comp(10471..11232)
DNA (762bp) protein (254aa)
Methionine aminopeptidase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2M7_SPHTD
methionine aminopeptidase
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
PLM4_65_coex_sep16_scaffold_6128_12
R_RIF_OD1_09_50_13, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(11210..11722)
DNA (513bp) protein (171aa)
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
adenylate kinase
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_09_50_13_curated
Displaying 16 items

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