ggKbase home page

PLM4_65_coex_sep16_scaffold_24884_2

Organism: PLM4_65_coex_sep16_Liptonbacteria_48_7

partial RP 36 / 55 MC: 2 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(535..1035)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 154.0
  • Bit_score: 163
  • Evalue 1.40e-37
rplE; 50S ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 162.0
  • Bit_score: 141
  • Evalue 2.20e-31
Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 164.0
  • Bit_score: 218
  • Evalue 4.00e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OD1_57_28 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGGCGCCTAAAAAAGAAGTAAACGAAATAAAAAATAAGATAGAAAAAATCGTGGTTAACGCGGGGGTGGGGCGGCTAAGCAGCCAGGCTAATTTCGAGGACAAAGTTTTGGTGCAGATTGAAAGAGACCTGGCGTTACTCACGGGACAAAAGCCGCAGGTTACGCGAGCAAAGAAATCTATCGCCGGATTTAAGACCAGGGAAGGCCAGATAGTGGGTGTGCGCATAACTCTCCGGGGCCGCAAAATGGTTGATTTTTTGGAGCGTTTGGTTAGAATTGTTCTGCCTCGCGTGCACGACTTCCGCGGCCTGGACATTAAGTCCGTGGACAAAGGAGGGGTGTTAAATATAGGGCTTCGGGAGCAAATGGTTTTCCCGGAGGTGAACCCGGAGCAATCTCCGGTTACCTTCCCTTTGGGGGTAAACATAGTGCCTAAAGAGAAAGTCCGCGAGGTTGCGATAGGGACCTACAAAGAATTAGGATTCCCGTTTAAAAAATAG
PROTEIN sequence
Length: 167
MAPKKEVNEIKNKIEKIVVNAGVGRLSSQANFEDKVLVQIERDLALLTGQKPQVTRAKKSIAGFKTREGQIVGVRITLRGRKMVDFLERLVRIVLPRVHDFRGLDIKSVDKGGVLNIGLREQMVFPEVNPEQSPVTFPLGVNIVPKEKVREVAIGTYKELGFPFKK*