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PLM4_65_coex_sep16_scaffold_24884

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_24884_1
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists


comp(1..330)
DNA (330bp) protein (110aa)
30S ribosomal protein S8 bin=GWC1_OD1_38_17 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rpsH; 30S ribosomal protein S8
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
PLM4_65_coex_sep16_scaffold_24884_2
R_OD1_57_28, Parcubacteria, Bacteria

Not on your lists


comp(535..1035)
DNA (501bp) protein (167aa)
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rplE; 50S ribosomal protein L5
Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
PLM4_65_coex_sep16_scaffold_24884_3
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists


comp(1044..1349)
DNA (306bp) protein (102aa)
LSU ribosomal protein L24P bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
50S ribosomal protein L24
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
PLM4_65_coex_sep16_scaffold_24884_4
R_OD1_53_13, Parcubacteria, Bacteria

Not on your lists


comp(1355..1723)
DNA (369bp) protein (123aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
50S ribosomal protein L14
Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated
PLM4_65_coex_sep16_scaffold_24884_5
GWB1_OD1_45_9, Parcubacteria, Bacteria

Not on your lists


comp(1725..2006)
DNA (282bp) protein (94aa)
30S ribosomal protein S17 {ECO:0000313|EMBL:KKU15324.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_45_9.;"
30S ribosomal protein S17 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
rpsQ; 30S ribosomal protein S17
PLM4_65_coex_sep16_scaffold_24884_6
RIFOXYD1_FULL_OD1_36_11_curated, Parcubacteria, Bacteria

Not on your lists


comp(2008..2199)
DNA (192bp) protein (64aa)
50S ribosomal protein L29P bin=GWA1_ZB2_49_26 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=RIFOXYD1_FULL_OD1_36_11_curated
PLM4_65_coex_sep16_scaffold_24884_7
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists


comp(2216..2632)
DNA (417bp) protein (139aa)
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rplP; 50S ribosomal protein L16
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
PLM4_65_coex_sep16_scaffold_24884_8
R_OD1_57_28, Parcubacteria, Bacteria

Not on your lists


comp(2619..3113)
DNA (495bp) protein (165aa)
30S ribosomal protein S3 Tax=uncultured organism RepID=U3GQD0_9ZZZZ
rpsC; 30S ribosomal subunit protein S3
Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
PLM4_65_coex_sep16_scaffold_24884_9
Parcubacteria bacterium GW2011_GWB1_56_8, Parcubacteria, Bacteria

Not on your lists


comp(3123..3626)
DNA (504bp) protein (168aa)
50S ribosomal protein L22 {ECO:0000313|EMBL:KKW46879.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_56_8.;"
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
50S ribosomal protein L22
PLM4_65_coex_sep16_scaffold_24884_10
Parcubacteria bacterium GW2011_GWB1_56_8, Parcubacteria, Bacteria

Not on your lists


comp(3629..3961)
DNA (333bp) protein (111aa)
Ribosomal protein S19 {ECO:0000313|EMBL:KKW46878.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_56_8.;"
Ribosomal protein S19 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
30S ribosomal protein S19
PLM4_65_coex_sep16_scaffold_24884_11
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists


comp(3969..4808)
DNA (840bp) protein (280aa)
gtn:GTNG_0109 rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rplB; 50S ribosomal protein L2
Tax=GWB1_OD1_49_6_curated
PLM4_65_coex_sep16_scaffold_24884_12
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists


comp(4813..5112)
DNA (300bp) protein (100aa)
50S ribosomal protein L23 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LXU0_HIPMA
50S ribosomal protein L23 {ECO:0000313|EMBL:KKW48458.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
50S ribosomal protein L25
PLM4_65_coex_sep16_scaffold_24884_13
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists


comp(5160..5528)
DNA (369bp) protein (123aa)
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rplD; 50S ribosomal protein L4
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
Displaying 13 items

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