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PLM0_60_coex_redo_sep16_scaffold_321

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_321_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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24..941
DNA (918bp) protein (306aa)
myo-inosose-2 dehydratase (EC:4.2.1.44)
Myo-inosose-2 dehydratase {ECO:0000313|EMBL:ADB53853.1}; EC=4.2.1.44 {ECO:0000313|EMBL:ADB53853.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037921BA
PLM0_60_coex_redo_sep16_scaffold_321_2
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

938..1930
DNA (993bp) protein (331aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI0003696695
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJK53046.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family
PLM0_60_coex_redo_sep16_scaffold_321_3
Rhodoluna lacicola, Rhodoluna, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1997..3073
DNA (1077bp) protein (359aa)
ribose ABC transporter permease Tax=Patulibacter americanus RepID=UPI0003B6B6DF
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component {ECO:0000313|EMBL:AIC48134.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Luna cluster; Luna-1 subcluster; Rhodoluna.;" source="Rhodoluna lacicola.;"
PLM0_60_coex_redo_sep16_scaffold_321_4
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

3081..3944
DNA (864bp) protein (288aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AEB12652.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AEB12652.1};; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
Monosaccharide-transporting ATPase Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKJ2_MARHT
PLM0_60_coex_redo_sep16_scaffold_321_5
Thermus sp. NMX2.A1, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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3958..5391
DNA (1434bp) protein (478aa)
Methylmalonic acid semialdehyde dehydrogenase Tax=Thermus oshimai JL-2 RepID=K7RM19_THEOS
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ETN89273.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. NMX2.A1.;"
methylmalonic acid semialdehyde dehydrogenase
PLM0_60_coex_redo_sep16_scaffold_321_6
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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5432..6538
DNA (1107bp) protein (369aa)
talB; transaldolase (EC:2.2.1.2)
Transaldolase {ECO:0000256|SAAS:SAAS00118670, ECO:0000313|EMBL:CCH87794.1}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670, ECO:0000313|EMBL:CCH87794.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Transaldolase Tax=Modestobacter marinus (strain BC501) RepID=I4EWN1_MODMB
PLM0_60_coex_redo_sep16_scaffold_321_7
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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6548..8428
DNA (1881bp) protein (627aa)
Thiamine pyrophosphate enzyme, central region Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVA0_RUBXD
thiamine pyrophosphate enzyme, central region
Thiamine pyrophosphate enzyme, central region {ECO:0000313|EMBL:ABG04678.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM0_60_coex_redo_sep16_scaffold_321_8
Paenibacillus sp. oral taxon 786, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8476..9225
DNA (750bp) protein (250aa)
5-deoxy-glucuronate isomerase {ECO:0000313|EMBL:EES74325.1}; EC=5.3.1.n1 {ECO:0000313|EMBL:EES74325.1};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. oral taxon 786 str. D14.;"
5-deoxy-glucuronate isomerase Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IYZ8_9BACL
myo-inositol catabolism IolB region
PLM0_60_coex_redo_sep16_scaffold_321_9
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

9248..10402
DNA (1155bp) protein (385aa)
sorbitol dehydrogenase (EC:1.1.1.14); K00008 L-iditol 2-dehydrogenase [EC:1.1.1.14] bin=bin8_Chloro species=unknown genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
sorbitol dehydrogenase (EC:1.1.1.14)
Tax=CSP1_4_Chloroflexi
PLM0_60_coex_redo_sep16_scaffold_321_10
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10532..11491
DNA (960bp) protein (320aa)
Plasmid pRM41A complete sequence Tax=Sinorhizobium meliloti Rm41 RepID=K0PH75_RHIML
hypothetical protein
LacI family transcriptional repressor {ECO:0000313|EMBL:BAD39755.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
PLM0_60_coex_redo_sep16_scaffold_321_11
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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11622..12515
DNA (894bp) protein (298aa)
Binding-protein-dependent transport systems inner membrane component Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QFV8_CATAD
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACU70935.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM0_60_coex_redo_sep16_scaffold_321_12
Paenibacillus sp. FSL R5-192, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12512..13387
DNA (876bp) protein (292aa)
hypothetical protein Tax=Paenibacillus sp. PAMC 26794 RepID=UPI0002F69D0B
Integral membrane transport protein {ECO:0000313|EMBL:ETT37630.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-192.;"
sugar ABC transporter permease
PLM0_60_coex_redo_sep16_scaffold_321_13
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13389..14627
DNA (1239bp) protein (413aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PQB7_9FIRM
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:EKP95132.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
sugar ABC transporter ATP-binding protein
PLM0_60_coex_redo_sep16_scaffold_321_14
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14617..16035
DNA (1419bp) protein (473aa)
ABC-type sugar transport system, periplasmic component Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9NJM1_RHILT
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EJB08164.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
extracellular solute-binding domain-containing protein
PLM0_60_coex_redo_sep16_scaffold_321_15
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16106..17227
DNA (1122bp) protein (374aa)
amidohydrolase Tax=Paenibacillus sp. JC66 RepID=UPI000289CB55
amidohydrolase
Amidohydrolase 2 {ECO:0000313|EMBL:EHB62332.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
PLM0_60_coex_redo_sep16_scaffold_321_16
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17224..17589
DNA (366bp) protein (122aa)
ferredoxin Tax=Amycolatopsis methanolica RepID=UPI00038035CE
hcaC2; Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:AIJ23912.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM0_60_coex_redo_sep16_scaffold_321_17
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(17670..18821)
DNA (1152bp) protein (384aa)
Galactonate dehydratase Tax=uncultured candidate division OP1 bacterium RepID=H5SVN5_9BACT
galactonate dehydratase
Tax=BJP_IG2158_Anaerolineales_38_74
PLM0_60_coex_redo_sep16_scaffold_321_18
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18818..19735)
DNA (918bp) protein (306aa)
hypothetical protein Tax=Cohnella laeviribosi RepID=UPI00037DE1F3
Xylose isomerase {ECO:0000313|EMBL:KIL35548.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
AP endonuclease, family 2
PLM0_60_coex_redo_sep16_scaffold_321_19
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19839..20108)
DNA (270bp) protein (90aa)
Galactonate dehydratase Tax=uncultured candidate division OP1 bacterium RepID=H5SVN5_9BACT
Mandelate racemase {ECO:0000313|EMBL:CEL18648.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
galactonate dehydratase
Displaying 19 items

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