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PLM0_60_coex_redo_sep16_scaffold_329

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_329_1
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..364)
DNA (363bp) protein (121aa)
Sugar phosphate isomerase/epimerase Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BLN6_MYCCN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI01894.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM0_60_coex_redo_sep16_scaffold_329_2
Streptomyces sp. PAMC26508, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(361..1356)
DNA (996bp) protein (332aa)
myo-inositol 2-dehydrogenase 1 (EC:1.1.1.18)
Myo-inositol 2-dehydrogenase 1 {ECO:0000313|EMBL:AGJ58257.1}; EC=1.1.1.18 {ECO:0000313|EMBL:AGJ58257.1};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PAMC26508.;"
Myo-inositol 2-dehydrogenase 1 Tax=Streptomyces sp. PAMC26508 RepID=M9U153_9ACTO
PLM0_60_coex_redo_sep16_scaffold_329_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1502..2521
DNA (1020bp) protein (340aa)
LacI family transcriptional regulator Tax=Actinomadura madurae LIID-AJ290 RepID=U2N2C3_9ACTO
regulatory protein LacI
Regulatory protein LacI {ECO:0000313|EMBL:AHG92061.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_coex_redo_sep16_scaffold_329_4
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

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comp(2507..3727)
DNA (1221bp) protein (407aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037BB0EB
major facilitator superfamily protein
Tax=RBG_16_Chloroflexi_50_11_curated
PLM0_60_coex_redo_sep16_scaffold_329_5
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

3757..4734
DNA (978bp) protein (326aa)
Xylose isomerase domain protein TIM barrel Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WQZ5_ALIAD
xylose isomerase domain-containing protein
Tax=RBG_16_Chloroflexi_54_11_curated
PLM0_60_coex_redo_sep16_scaffold_329_6
Streptomyces spectabilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4799..5920
DNA (1122bp) protein (374aa)
SpcB Tax=Streptomyces spectabilis RepID=Q9S3X6_STRST
SpcB {ECO:0000313|EMBL:AAD50452.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces spectabilis.;"
oxidoreductase domain-containing protein
PLM0_60_coex_redo_sep16_scaffold_329_7
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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5917..6837
DNA (921bp) protein (307aa)
2-keto-myo-inositol dehydratase {ECO:0000313|EMBL:ABK53588.1}; EC=4.2.1.44 {ECO:0000313|EMBL:ABK53588.1};; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
2-keto-myo-inositol dehydratase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LVX8_ACIC1
xylose isomerase domain-containing protein
PLM0_60_coex_redo_sep16_scaffold_329_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6846..7766
DNA (921bp) protein (307aa)
Rhizopine catabolism protein MocA {ECO:0000313|EMBL:EYR81593.1}; EC=1.-.-.- {ECO:0000313|EMBL:EYR81593.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Inositol 2-dehydrogenase (EC:1.1.1.18)
Rhizopine catabolism protein MocA Tax=Shinella zoogloeoides DD12 RepID=V5D2W0_9RHIZ
PLM0_60_coex_redo_sep16_scaffold_329_9
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7794..8900
DNA (1107bp) protein (369aa)
dehydrogenase Tax=Paenibacillus ginsengihumi RepID=UPI0003643BF8
Dehydrogenase {ECO:0000313|EMBL:KFD42935.1}; species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
oxidoreductase domain-containing protein
PLM0_60_coex_redo_sep16_scaffold_329_10
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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8985..10628
DNA (1644bp) protein (548aa)
amino acid permease bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
amino acid transporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM0_60_coex_redo_sep16_scaffold_329_11
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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10767..11609
DNA (843bp) protein (281aa)
Ser/Thr protein phosphatase family protein Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1Q7_THERP
Ser/Thr protein phosphatase family protein
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:ACM05572.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM0_60_coex_redo_sep16_scaffold_329_12
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

11572..12357
DNA (786bp) protein (262aa)
Putative uncharacterized protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXY9_RUBXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG03739.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM0_60_coex_redo_sep16_scaffold_329_13
Paenibacillus sp. FSL R5-808, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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12354..13004
DNA (651bp) protein (217aa)
Membrane-associated phospholipid phosphatase Tax=Bacillus bataviensis LMG 21833 RepID=K6CX19_9BACI
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:ETT34428.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-808.;"
PAP2 superfamily protein
PLM0_60_coex_redo_sep16_scaffold_329_14
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

13001..13867
DNA (867bp) protein (289aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase {ECO:0000313|EMBL:ABX03141.1}; EC=4.1.1.68 {ECO:0000313|EMBL:ABX03141.1};; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AV63_HERA2
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
PLM0_60_coex_redo_sep16_scaffold_329_15
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

13874..14656
DNA (783bp) protein (261aa)
Aldo/keto reductase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LXM6_HALO1
aldo/keto reductase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM0_60_coex_redo_sep16_scaffold_329_16
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

14670..15590
DNA (921bp) protein (307aa)
Dihydrodipicolinate synthetase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5L0_SPHTD
dihydrodipicolinate synthetase
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:ACZ37526.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM0_60_coex_redo_sep16_scaffold_329_17
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15606..16166
DNA (561bp) protein (187aa)
Two component transcriptional regulator, winged helix family Tax=Odoribacter RepID=F9Z8N2_ODOSD
two component transcriptional regulator, winged helix family
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CDB08677.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
PLM0_60_coex_redo_sep16_scaffold_329_18
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(16170..18116)
DNA (1947bp) protein (649aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00037C8020
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AGZ39074.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM0_60_coex_redo_sep16_scaffold_329_19
Mycobacterium farcinogenes, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18113..19297)
DNA (1185bp) protein (395aa)
glycosyl transferase family protein (EC:2.4.-.-)
Glycosyl transferase family 2 Tax=Frankia sp. EUN1f RepID=D3D9A9_9ACTO
Glycosyl transferase family protein {ECO:0000313|EMBL:CDP89972.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium farcinogenes.;"
PLM0_60_coex_redo_sep16_scaffold_329_20
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19342..19833)
DNA (492bp) protein (164aa)
HNH endonuclease Tax=Frankia sp. CN3 RepID=G6H5X6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJE21704.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
hypothetical protein
Displaying 20 items

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