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PLM0_60_coex_redo_sep16_scaffold_349

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_349_1
Thermus scotoductus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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3..497
DNA (495bp) protein (165aa)
GTP-binding protein YchF Tax=Thermus islandicus RepID=UPI0003B51045
ychF; GTP-binding protein YchF
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus scotoductus (strain ATCC 700910 / SA-01).;"
PLM0_60_coex_redo_sep16_scaffold_349_2
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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659..1024
DNA (366bp) protein (122aa)
Glycine cleavage system H protein Tax=gamma proteobacterium HdN1 RepID=E1VFW7_9GAMM
gcvH; glycine cleavage H-protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
PLM0_60_coex_redo_sep16_scaffold_349_3
unknown

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1365..1610
DNA (246bp) protein (82aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_349_4
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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1662..2174
DNA (513bp) protein (171aa)
Putative uncharacterized protein Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T384_PALPW
hypothetical protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM0_60_coex_redo_sep16_scaffold_349_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2217..3410
DNA (1194bp) protein (398aa)
arsenite-activated ATPase ArsA (EC:3.6.3.16)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM0_60_coex_redo_sep16_scaffold_349_6
unknown

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3407..3682
DNA (276bp) protein (92aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_349_7
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

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3679..4389
DNA (711bp) protein (237aa)
Peptidase M50 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A4Y5_NATTJ
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ACB85227.1}; species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 /; JW/NM-WN-LF).;"
PLM0_60_coex_redo_sep16_scaffold_349_8
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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4335..5702
DNA (1368bp) protein (456aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
L-seryl-tRNA(Sec) selenium transferase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I009_CALAS
selA; L-seryl-tRNA(Sec) selenium transferase
PLM0_60_coex_redo_sep16_scaffold_349_9
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

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5699..7534
DNA (1836bp) protein (612aa)
sti:Sthe_1974 selenocysteine-specific translation elongation factor; K03833 selenocysteine-specific elongation factor bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
selenocysteine-specific translation elongation factor
Tax=RBG_13_Chloroflexi_53_26_curated
PLM0_60_coex_redo_sep16_scaffold_349_10
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7547..8419
DNA (873bp) protein (291aa)
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
Methylenetetrahydrofolate reductase Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JEQ3_ANAD2
PLM0_60_coex_redo_sep16_scaffold_349_11
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8430..9302
DNA (873bp) protein (291aa)
Transcriptional regulator/sugar kinase Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CYL2_PELTS
NagC; transcriptional regulator/sugar kinase
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:BAF60915.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI).;"
PLM0_60_coex_redo_sep16_scaffold_349_12
Caldithrix abyssi, Caldithrix, Bacteria

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9281..10633
DNA (1353bp) protein (451aa)
uncharacterized domain HDIG (EC:2.7.7.72 3.1.3.- 3.1.4.-)
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase Tax=Caldithrix abyssi DSM 13497 RepID=H1XX62_9BACT
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase {ECO:0000313|EMBL:EHO40799.1}; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
PLM0_60_coex_redo_sep16_scaffold_349_13
Pontibacillus marinus, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10707..11219
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IAH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGX84751.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus marinus BH030004 = DSM 16465.;"
Integral membrane protein CcmA involved in cell shape determination
PLM0_60_coex_redo_sep16_scaffold_349_14
unknown

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11206..11676
DNA (471bp) protein (157aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_349_15
CSP1_5_NC10, NC10, Bacteria

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11715..12719
DNA (1005bp) protein (335aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
glpX; fructose 1,6-bisphosphatase II
Tax=CSP1_5_NC10
PLM0_60_coex_redo_sep16_scaffold_349_16
unknown

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12836..13510
DNA (675bp) protein (225aa)
PLM0_60_coex_redo_sep16_scaffold_349_17
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

13860..15062
DNA (1203bp) protein (401aa)
Putative uncharacterized protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S6L4_ACTS5
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM0_60_coex_redo_sep16_scaffold_349_18
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15021..16292)
DNA (1272bp) protein (424aa)
Uncharacterized protein {ECO:0000313|EMBL:KFA88544.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
major facilitator superfamily protein bin=RBG_19FT_COMBO_GAL15_69_19 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
major facilitator superfamily protein
PLM0_60_coex_redo_sep16_scaffold_349_19
unknown

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16358..16780
DNA (423bp) protein (141aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_349_20

Not on your lists


16786..17226
DNA (441bp) protein (147aa)
50S ribosomal protein L9 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B51FA2
Ribosomal protein L9 {ECO:0000313|EMBL:CBH76051.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
50S ribosomal protein L9
PLM0_60_coex_redo_sep16_scaffold_349_21
Deinococcus proteolyticus, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

17299..19506
DNA (2208bp) protein (736aa)
Replicative DNA helicase Tax=Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703) RepID=F0RLL8_DEIPM
replicative DNA helicase
Replicative DNA helicase {ECO:0000313|EMBL:ADY26942.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 /; NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703).;"
Displaying 21 items

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