ggKbase home page

PLM0_60_coex_redo_sep16_scaffold_376

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_376_1
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(2..754)
DNA (753bp) protein (251aa)
Glucose-methanol-choline oxidoreductase Tax=Sorangium cellulosum So0157-2 RepID=S4XN93_SORCE
glucose-methanol-choline oxidoreductase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM0_60_coex_redo_sep16_scaffold_376_2
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(804..2714)
DNA (1911bp) protein (637aa)
L-lactate permease Tax=Modestobacter marinus (strain BC501) RepID=I4F4I9_MODMB
lutP; L-lactate permease
L-lactate permease {ECO:0000313|EMBL:CCH90552.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM0_60_coex_redo_sep16_scaffold_376_3
unknown

Not on your lists

comp(2761..3429)
DNA (669bp) protein (223aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_376_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3475..5262)
DNA (1788bp) protein (596aa)
Putative uncharacterized protein Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BYB0_BEUC1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PLM0_60_coex_redo_sep16_scaffold_376_5
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5316..6407
DNA (1092bp) protein (364aa)
Fatty acid desaturase Tax=Micromonospora sp. ATCC 39149 RepID=C4RQE7_9ACTO
Fatty acid desaturase {ECO:0000313|EMBL:EEP71487.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
fatty acid desaturase
PLM0_60_coex_redo_sep16_scaffold_376_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

6459..8303
DNA (1845bp) protein (615aa)
GTP-binding protein TypA Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TIJ3_9CHLR
GTP-binding protein TypA {ECO:0000313|EMBL:EFH89250.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
GTP-binding protein
PLM0_60_coex_redo_sep16_scaffold_376_7
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

8424..8621
DNA (198bp) protein (66aa)
Cold-shock domain family protein bin=GWC2_Chloroflexi_73_18 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
cold-shock DNA-binding protein family
Tax=GWC2_RIF_CHLX_73_18_curated
PLM0_60_coex_redo_sep16_scaffold_376_8
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(8709..10274)
DNA (1566bp) protein (522aa)
Putative Ribose import ATP-binding protein RbsA Tax=Streptomyces afghaniensis 772 RepID=S4MUI0_9ACTO
ABC transporter
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM0_60_coex_redo_sep16_scaffold_376_9
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10255..11178)
DNA (924bp) protein (308aa)
hypothetical protein Tax=Bordetella sp. FB-8 RepID=UPI0003612464
amino acid ABC transporter
Amino acid ABC transporter {ECO:0000313|EMBL:AJP57039.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
PLM0_60_coex_redo_sep16_scaffold_376_10
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11182..12096)
DNA (915bp) protein (305aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SCX7_INTC7
amino acid ABC transporter
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM0_60_coex_redo_sep16_scaffold_376_11
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12141..13343)
DNA (1203bp) protein (401aa)
hypothetical protein Tax=Smaragdicoccus niigatensis RepID=UPI000361D525
extracellular ligand-binding receptor
ABC-type branched-chain amino acid transport system, outer-membrane component {ECO:0000313|EMBL:CCG02527.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM0_60_coex_redo_sep16_scaffold_376_12
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(13404..14234)
DNA (831bp) protein (277aa)
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037F19F1
Polyphosphate kinase {ECO:0000313|EMBL:KIJ79570.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
PLM0_60_coex_redo_sep16_scaffold_376_13
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14261..15217)
DNA (957bp) protein (319aa)
Trypsin-like serine protease with C-terminal PDZ domain Tax=Frankia sp. QA3 RepID=I9KMU4_9ACTO
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:EIV95658.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
peptidase S1 and S6 chymotrypsin/Hap
PLM0_60_coex_redo_sep16_scaffold_376_14
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15267..16325)
DNA (1059bp) protein (353aa)
Molybdenum import ATP-binding protein ModC Tax=Micromonospora lupini str. Lupac 08 RepID=I0L5I3_9ACTO
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJY39447.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
ABC transporter ATP-binding protein
PLM0_60_coex_redo_sep16_scaffold_376_15
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16307..17062)
DNA (756bp) protein (252aa)
Molybdate ABC transporter, inner membrane subunit Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A6W2_THECD
molybdate ABC transporter inner membrane subunit
Molybdate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ACY98366.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM0_60_coex_redo_sep16_scaffold_376_16
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(17089..17841)
DNA (753bp) protein (251aa)
Molybdenum ABC transporter, periplasmic molybdate-binding protein Tax=Nitrolancetus hollandicus Lb RepID=I4EJV4_9CHLR
Molybdenum ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:CCF84966.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
molybdate-binding protein
PLM0_60_coex_redo_sep16_scaffold_376_17
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17834..18229)
DNA (396bp) protein (132aa)
Putative transcriptional regulator involved in molybdate uptake Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RTD1_BLASD
putative transcriptional regulator involved in molybdate uptake
Putative transcriptional regulator involved in molybdate uptake {ECO:0000313|EMBL:CCG05631.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM0_60_coex_redo_sep16_scaffold_376_18
Alcanivorax jadensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18401..19015)
DNA (615bp) protein (205aa)
Putative uncharacterized protein Tax=Alcanivorax sp. DG881 RepID=B4X5B2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGD59999.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax jadensis T9.;"
hypothetical protein
Displaying 18 items

View Taxonomy