ggKbase home page

PLM0_60_coex_redo_sep16_scaffold_415

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_415_1
unknown

Not on your lists

comp(3..218)
DNA (216bp) protein (72aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_415_2
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

Not on your lists

634..1395
DNA (762bp) protein (254aa)
ABC transporter related protein Tax=Frankia sp. (strain EuI1c) RepID=E3IV98_FRASU
ABC transporter
Tax=RBG_13_Chloroflexi_60_13_curated
PLM0_60_coex_redo_sep16_scaffold_415_3
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1395..2114
DNA (720bp) protein (240aa)
ABC transporter related protein Tax=alpha proteobacterium BAL199 RepID=A8TJV8_9PROT
ABC transporter related protein {ECO:0000313|EMBL:EDP66898.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
ABC transporter ATP-binding protein
PLM0_60_coex_redo_sep16_scaffold_415_4
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2114..2995
DNA (882bp) protein (294aa)
Putative High-affinity branched-chain amino acid transport system permease protein LivH Tax=Streptomyces afghaniensis 772 RepID=S4MW05_9ACTO
Putative High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:EPJ37952.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
inner-membrane translocator
PLM0_60_coex_redo_sep16_scaffold_415_5
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2995..4089
DNA (1095bp) protein (365aa)
ABC transporter permease protein Tax=alpha proteobacterium BAL199 RepID=A8TJV5_9PROT
inner-membrane translocator
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM0_60_coex_redo_sep16_scaffold_415_6
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4143..5378
DNA (1236bp) protein (412aa)
Putative ABC-type branched-chain amino acid transporter Tax=Bradyrhizobiaceae RepID=F7QIP7_9BRAD
putative ABC-type branched-chain amino acid transporter, periplasmic binding protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
PLM0_60_coex_redo_sep16_scaffold_415_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5442..6197
DNA (756bp) protein (252aa)
Putative uncharacterized protein Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K875_NITWC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PLM0_60_coex_redo_sep16_scaffold_415_8
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(6234..6686)
DNA (453bp) protein (151aa)
hypothetical protein bin=bin9_gal15 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=CSP1_3_Armatimonadetes
PLM0_60_coex_redo_sep16_scaffold_415_9
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(6687..7079)
DNA (393bp) protein (131aa)
MaoC domain protein dehydratase Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K420_DEHLB
MaoC domain-containing protein dehydratase
Tax=CG_Dehalo_02
PLM0_60_coex_redo_sep16_scaffold_415_10
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(7076..7495)
DNA (420bp) protein (140aa)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI00035C67B0
hypothetical protein
Tax=RBG_13_Chloroflexi_51_18_curated
PLM0_60_coex_redo_sep16_scaffold_415_11
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7492..8664)
DNA (1173bp) protein (391aa)
Acyl-CoA dehydrogenase domain-containing protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AXQ5_STRRD
Uncharacterized protein {ECO:0000313|EMBL:ETX01989.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
acyl-CoA dehydrogenase domain-containing protein
PLM0_60_coex_redo_sep16_scaffold_415_12
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

8701..9102
DNA (402bp) protein (134aa)
TM2 multi-domain protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CXS6_9ARCH
TM2 multi-domain protein {ECO:0000313|EMBL:EGP94042.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
PLM0_60_coex_redo_sep16_scaffold_415_13
unknown

Not on your lists

comp(9517..9915)
DNA (399bp) protein (133aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_415_14
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10028..10813)
DNA (786bp) protein (262aa)
enoyl-(acyl-carrier-protein) reductase (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
Enoyl-[acyl-carrier-protein] reductase [NADH] Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08XT8_STIAD
PLM0_60_coex_redo_sep16_scaffold_415_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10832..11659)
DNA (828bp) protein (276aa)
thiosulfate sulfurtransferase (EC:2.8.1.1)
Thiosulfate sulfurtransferase Tax=Sorangium cellulosum (strain So ce56) RepID=A9GXE8_SORC5
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
PLM0_60_coex_redo_sep16_scaffold_415_16
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11656..12312)
DNA (657bp) protein (219aa)
beta-lactamase Tax=Frankia sp. Iso899 RepID=UPI0003B7569A
beta-lactamase
Beta-lactamase-like protein {ECO:0000313|EMBL:AIY18126.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
PLM0_60_coex_redo_sep16_scaffold_415_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(12313..13203)
DNA (891bp) protein (297aa)
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-)
Protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3N1_THERP
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PLM0_60_coex_redo_sep16_scaffold_415_18
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(13200..14108)
DNA (909bp) protein (303aa)
Protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
cytochrome oxidase assembly
Tax=GWC2_RIF_CHLX_73_18_curated
PLM0_60_coex_redo_sep16_scaffold_415_19
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14118..15473)
DNA (1356bp) protein (452aa)
Uncharacterized protein Tax=Afipia felis ATCC 53690 RepID=K8NYK8_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS31243.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
Cytochrome c-type biogenesis protein CcmG/DsbE,thiol:disulfide oxidoreductase
PLM0_60_coex_redo_sep16_scaffold_415_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15515..16378)
DNA (864bp) protein (288aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B33E00
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM0_60_coex_redo_sep16_scaffold_415_21
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(16588..17355)
DNA (768bp) protein (256aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
lysine decarboxylase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM0_60_coex_redo_sep16_scaffold_415_22
unknown

Not on your lists

comp(17361..18008)
DNA (648bp) protein (216aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_415_23
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17953..18453)
DNA (501bp) protein (167aa)
Putative uncharacterized protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HG47_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27693.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
Displaying 23 items

View Taxonomy