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PLM0_60_coex_redo_sep16_scaffold_6914

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_6914_1
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(51..479)
DNA (429bp) protein (143aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000255|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000255|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000255|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000255|HAMAP-Rule:MF_00169}; species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562).;"
3-dehydroquinate dehydratase Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=AROQ_HALOH
PLM0_60_coex_redo_sep16_scaffold_6914_2
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(476..1552)
DNA (1077bp) protein (359aa)
3-dehydroquinate synthase {ECO:0000255|HAMAP-Rule:MF_00110}; EC=4.2.3.4 {ECO:0000255|HAMAP-Rule:MF_00110};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
3-dehydroquinate synthase Tax=Desulfotomaculum reducens (strain MI-1) RepID=AROB_DESRM
3-dehydroquinate synthase
PLM0_60_coex_redo_sep16_scaffold_6914_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(1540..2007)
DNA (468bp) protein (156aa)
aroK; shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] bin=bin1_lowGC species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
shikimate kinase (EC:2.7.1.71)
Tax=CSP1_2_Dadabacteria
PLM0_60_coex_redo_sep16_scaffold_6914_4
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(2034..2576)
DNA (543bp) protein (181aa)
membrane protein Tax=Salinispora pacifica RepID=UPI00036E4B30
membrane-flanked domain-containing protein
Membrane-flanked domain protein {ECO:0000313|EMBL:AEB42908.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM0_60_coex_redo_sep16_scaffold_6914_5
CG_OP9-01, Atribacteria, Bacteria

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comp(2583..3224)
DNA (642bp) protein (214aa)
comC; type 4 prepilin-like proteins leader peptide-processing enzyme ComC (EC:3.4.23.43 2.1.1.-)
hypothetical protein Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI0003653069
Tax=CG_OP9-01
PLM0_60_coex_redo_sep16_scaffold_6914_6
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3221..3943)
DNA (723bp) protein (241aa)
Shikimate dehydrogenase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NPG9_ROSCS
shikimate 5-dehydrogenase
Tax=BJP_08E140C01_Clostridiales_46_19
PLM0_60_coex_redo_sep16_scaffold_6914_7
RIFOXYC2_FULL_PER-ii_58_32_curated, PER-ii, Bacteria

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comp(3991..5037)
DNA (1047bp) protein (349aa)
periplasmic solute-binding protein; K07082 UPF0755 protein bin=bin9_gal15 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
aminodeoxychorismate lyase
Tax=RIFOXYC2_FULL_PER-ii_58_32_curated
PLM0_60_coex_redo_sep16_scaffold_6914_8
unknown

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comp(5034..5270)
DNA (237bp) protein (79aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_6914_9
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5260..5664)
DNA (405bp) protein (135aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
Putative Holliday junction resolvase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQA7_ROSCS
Holliday junction resolvase YqgF
PLM0_60_coex_redo_sep16_scaffold_6914_10
unknown

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comp(5682..6374)
DNA (693bp) protein (231aa)

This feature has no annotations

Displaying 10 items

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