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PLM0_60_coex_redo_sep16_scaffold_1079

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_1079_1
Selenomonas artemidis, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1..168)
DNA (168bp) protein (56aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas artemidis F0399.;"
D-tyrosyl-tRNA(Tyr) deacylase Tax=Selenomonas RepID=E4LJ02_9FIRM
D-tyrosyl-tRNA(Tyr) deacylase
PLM0_60_coex_redo_sep16_scaffold_1079_2
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(255..1112)
DNA (858bp) protein (286aa)
acetyl-CoA carboxylase, carboxyl transferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha Tax=Roseiflexus sp. (strain RS-1) RepID=A5UY58_ROSS1
PLM0_60_coex_redo_sep16_scaffold_1079_3
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(1109..1942)
DNA (834bp) protein (278aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] bin=bin8_Chloro species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
acetyl-CoA carboxylase carboxyl transferase subunit beta
PLM0_60_coex_redo_sep16_scaffold_1079_4
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1939..2667)
DNA (729bp) protein (243aa)
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KHW0_9FIRM
3-oxoacyl-(acyl-carrier-protein) reductase
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AGL02199.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
PLM0_60_coex_redo_sep16_scaffold_1079_5
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(2668..3603)
DNA (936bp) protein (312aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
Malonyl CoA-acyl carrier protein transacylase Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYX4_ROSS1
malonyl CoA-acyl carrier protein transacylase
PLM0_60_coex_redo_sep16_scaffold_1079_6
Paenibacillus sp. Aloe-11, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3594..4631)
DNA (1038bp) protein (346aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. Aloe-11.;"
fabH3; 3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 Tax=Paenibacillus sp. Aloe-11 RepID=H6CHL2_9BACL
PLM0_60_coex_redo_sep16_scaffold_1079_7
Thermoanaerobacterium xylanolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(4637..4894)
DNA (258bp) protein (86aa)
Acyl carrier protein Tax=Thermoanaerobacterium RepID=D9TN92_THETC
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 /; LX-11).;"
PLM0_60_coex_redo_sep16_scaffold_1079_8
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4906..6165)
DNA (1260bp) protein (420aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Desmospora sp. 8437 RepID=F5SCR3_9BACL
3-oxoacyl-(acyl-carrier-protein) synthase 2
PLM0_60_coex_redo_sep16_scaffold_1079_9
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6270..7550)
DNA (1281bp) protein (427aa)
Purine catabolism regulatory protein-like family Tax=Paenibacillus RepID=F5LPP1_9BACL
Purine catabolism regulatory protein-like family {ECO:0000313|EMBL:EGL15773.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
transcriptional regulator
PLM0_60_coex_redo_sep16_scaffold_1079_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(7664..8401)
DNA (738bp) protein (246aa)
dienelactone hydrolase Tax=Frankia sp. Iso899 RepID=UPI0003B5AE00
dienelactone hydrolase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM0_60_coex_redo_sep16_scaffold_1079_11
Kocuria palustris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8414..8836)
DNA (423bp) protein (141aa)
HIT family protein Tax=Kocuria palustris PEL RepID=M2YBN2_9MICC
HIT family protein {ECO:0000313|EMBL:EME36039.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria palustris PEL.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
PLM0_60_coex_redo_sep16_scaffold_1079_12

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8860..9753
DNA (894bp) protein (298aa)
Putative ABC efflux transporter (ATP-binding protein) Tax=mine drainage metagenome RepID=E6PH73_9ZZZZ
Putative ABC efflux transporter (ATP-binding protein) {ECO:0000313|EMBL:CBH75811.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ABC transporter ATP-binding protein
PLM0_60_coex_redo_sep16_scaffold_1079_13

Not on your lists

9795..10547
DNA (753bp) protein (251aa)
Putative ABC transporter (Permease) Tax=mine drainage metagenome RepID=E6Q212_9ZZZZ
Putative ABC transporter (Permease) {ECO:0000313|EMBL:CBI01222.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ABC transporter
PLM0_60_coex_redo_sep16_scaffold_1079_14
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(10540..11496)
DNA (957bp) protein (319aa)
PfkB domain protein Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AYL3_HERA2
ribokinase-like domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ABX04991.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM0_60_coex_redo_sep16_scaffold_1079_15
unknown

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comp(11569..12063)
DNA (495bp) protein (165aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_1079_16
unknown

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comp(12133..12459)
DNA (327bp) protein (109aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_1079_17
unknown

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comp(12469..13302)
DNA (834bp) protein (278aa)

This feature has no annotations

Displaying 17 items

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