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PLM0_60_coex_redo_sep16_scaffold_1216

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_1216_1
Acetobacter aceti, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..770
DNA (768bp) protein (256aa)
transporter Tax=Acetobacter aceti RepID=UPI00022607F0
Transporter substrate-binding periplasmic protein {ECO:0000313|EMBL:GAN57625.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; Acetobacter subgen. Acetobacter.;" source="Acetobacter aceti NBRC 14818.;"
ABC transporter binding protein
PLM0_60_coex_redo_sep16_scaffold_1216_2
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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837..1685
DNA (849bp) protein (283aa)
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:KEZ77512.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
spermidine/putrescine ABC transporter permease bin=GWC2_Chloroflexi_73_18 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
potH; binding-protein-dependent transport systems inner membrane component
PLM0_60_coex_redo_sep16_scaffold_1216_3
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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1896..2396
DNA (501bp) protein (167aa)
Inner membrane ABC transporter permease protein {ECO:0000313|EMBL:KEZ77511.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
transmembrane component of ABC transporter; K02053 putative spermidine/putrescine transport system permease protein bin=RBG_19FT_COMBO_GAL15_69_19 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ABC-type spermidine/putrescine transport system, permease component II
PLM0_60_coex_redo_sep16_scaffold_1216_4
unknown

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comp(2436..2882)
DNA (447bp) protein (149aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_1216_5
unknown

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comp(2885..3175)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_1216_6
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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3202..4632
DNA (1431bp) protein (477aa)
Uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
FAD-dependent oxidoreductase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM0_60_coex_redo_sep16_scaffold_1216_7
GWB1_OP11_38_8, Woesebacteria, Microgenomates, Bacteria

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comp(4682..5455)
DNA (774bp) protein (258aa)
type 11 methyltransferase bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Uncharacterized protein {ECO:0000313|EMBL:KKQ84594.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_38_8.;"
type 11 methyltransferase
PLM0_60_coex_redo_sep16_scaffold_1216_8
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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5502..5768
DNA (267bp) protein (89aa)
hypothetical protein bin=bin8_Chloro species=Thermomonospora curvata genus=Thermomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=CSP1_4_Chloroflexi
PLM0_60_coex_redo_sep16_scaffold_1216_9
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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5797..6837
DNA (1041bp) protein (347aa)
phenylalanine dehydrogenase Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF2E9
glutamate/leucine/phenylalanine/valinedehydrogen ase
Tax=RBG_16_Chloroflexi_54_18_curated
PLM0_60_coex_redo_sep16_scaffold_1216_10
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6830..7582)
DNA (753bp) protein (251aa)
hypothetical protein Tax=Desulfurispora thermophila RepID=UPI00036E7DFD
type 11 methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM0_60_coex_redo_sep16_scaffold_1216_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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7698..8021
DNA (324bp) protein (108aa)
Putative transcriptional regulator Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YWZ5_NOCFA
transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PLM0_60_coex_redo_sep16_scaffold_1216_12
unknown

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8267..9205
DNA (939bp) protein (313aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_1216_13
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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comp(9237..9800)
DNA (564bp) protein (188aa)
Tax=RBG_13_Chloroflexi_68_17_curated
PLM0_60_coex_redo_sep16_scaffold_1216_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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9868..10956
DNA (1089bp) protein (363aa)
Alpha/beta hydrolase fold protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQZ7_PSEUX
alpha/beta hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEA23696.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM0_60_coex_redo_sep16_scaffold_1216_15
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

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comp(10967..11839)
DNA (873bp) protein (291aa)
YpfJ protein zinc metalloprotease superfamily Tax=Patulibacter medicamentivorans RepID=H0EB38_9ACTN
hypothetical protein
Tax=BJP_IG2069_Chloroflexi_70_12
PLM0_60_coex_redo_sep16_scaffold_1216_16
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11947..12918)
DNA (972bp) protein (324aa)
2-nitropropane dioxygenase NPD Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SCK8_GEOOG
2-nitropropane dioxygenase NPD
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM0_60_coex_redo_sep16_scaffold_1216_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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12997..14094
DNA (1098bp) protein (366aa)
Filamentation induced by cAMP protein Fic Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1R7_CONWI
filamentation induced by cAMP protein fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ADB54098.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 17 items

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