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PLM0_60_coex_redo_sep16_scaffold_1336

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_1336_1
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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3..923
DNA (921bp) protein (307aa)
Cystathionine beta-synthase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5Q2_SPHTD
cystathionine beta-synthase
Cystathionine beta-synthase {ECO:0000313|EMBL:ACZ39454.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM0_60_coex_redo_sep16_scaffold_1336_2
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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926..2083
DNA (1158bp) protein (386aa)
Cystathionine gamma-lyase Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AJ35_PYRYC
cystathionine gamma-lyase
Cystathionine gamma-lyase {ECO:0000313|EMBL:AEH24553.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus yayanosii (strain CH1 / JCM 16557).;"
PLM0_60_coex_redo_sep16_scaffold_1336_3
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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2093..3757
DNA (1665bp) protein (555aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase Tax=Cystobacter fuscus DSM 2262 RepID=S9QTF5_9DELT
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM0_60_coex_redo_sep16_scaffold_1336_4
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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comp(3754..4353)
DNA (600bp) protein (200aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM0_60_coex_redo_sep16_scaffold_1336_5
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(4361..4918)
DNA (558bp) protein (186aa)
3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33 4.2.1.35)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000313|EMBL:CCW36527.1};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
3-isopropylmalate dehydratase small subunit Tax=Chthonomonas calidirosea T49 RepID=S0EZR4_9BACT
PLM0_60_coex_redo_sep16_scaffold_1336_6
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(4955..6331)
DNA (1377bp) protein (459aa)
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33 4.2.1.35)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
3-isopropylmalate dehydratase large subunit Tax=Chthonomonas calidirosea T49 RepID=S0F054_9BACT
PLM0_60_coex_redo_sep16_scaffold_1336_7
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

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6608..8275
DNA (1668bp) protein (556aa)
dev:DhcVS_737 ilvB; acetolactate synthase, large subunit, biosynthetic type; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
acetolactate synthase large subunit (EC:2.2.1.6)
Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
PLM0_60_coex_redo_sep16_scaffold_1336_8
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

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8272..8790
DNA (519bp) protein (173aa)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:AAW39925.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AAW39925.1};; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195); (Dehalococcoides ethenogenes (strain 195)).;"
Acetolactate synthase, small subunit Tax=Dehalococcoides sp. (strain VS) RepID=D2BHR8_DEHSV
acetolactate synthase
PLM0_60_coex_redo_sep16_scaffold_1336_9
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

8787..9779
DNA (993bp) protein (331aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Ketol-acid reductoisomerase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C423_SPHTD
PLM0_60_coex_redo_sep16_scaffold_1336_10
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9776..11068
DNA (1293bp) protein (431aa)
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
2-isopropylmalate synthase Tax=Desulfurispora thermophila RepID=UPI00037EF648
PLM0_60_coex_redo_sep16_scaffold_1336_11
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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11065..11874
DNA (810bp) protein (270aa)
Prephenate dehydratase {ECO:0000256|RuleBase:RU361254}; Short=PDT {ECO:0000256|RuleBase:RU361254};; EC=4.2.1.51 {ECO:0000256|RuleBase:RU361254};; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus filiformis.;"
Prephenate dehydratase Tax=Thermus sp. CCB_US3_UF1 RepID=G8N8Y5_9DEIN
Prephenate dehydratase
PLM0_60_coex_redo_sep16_scaffold_1336_12
unknown

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12111..12275
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 12 items

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