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PLM0_60_coex_redo_sep16_scaffold_5493

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_5493_1
unknown

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3..1121
DNA (1119bp) protein (373aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_5493_2
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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1249..2094
DNA (846bp) protein (282aa)
30S ribosomal protein S2 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=RS2_HALOH
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000255|HAMAP-Rule:MF_00291}; species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562).;"
PLM0_60_coex_redo_sep16_scaffold_5493_3
Caldisericum exile, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

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2094..2708
DNA (615bp) protein (205aa)
Elongation factor Ts Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GJJ5_CALEA
tsf; elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; species="Bacteria; Caldiserica; Caldisericia; Caldisericales; Caldisericaceae; Caldisericum.;" source="Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01).;"
PLM0_60_coex_redo_sep16_scaffold_5493_4
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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2734..3465
DNA (732bp) protein (244aa)
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UK {ECO:0000255|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000255|HAMAP-Rule:MF_01220};; Uridine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UMP kinase {ECO:0000255|HAMAP-Rule:MF_01220};; Short=UMPK {ECO:0000255|HAMAP-Rule:MF_01220};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
Uridylate kinase Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=PYRH_CARHZ
PLM0_60_coex_redo_sep16_scaffold_5493_5
Bacillus smithii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3462..4019
DNA (558bp) protein (186aa)
Ribosome-recycling factor Tax=Bacillus smithii 7_3_47FAA RepID=G9QMU3_9BACI
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus smithii 7_3_47FAA.;"
frr; ribosome recycling factor
PLM0_60_coex_redo_sep16_scaffold_5493_6
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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4052..4834
DNA (783bp) protein (261aa)
Isoprenyl transferase Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0THE2_HELMI
uppS; undecaprenyl diphosphate synthase
Tax=RBG_13_Chloroflexi_66_10_curated
PLM0_60_coex_redo_sep16_scaffold_5493_7
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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4831..5676
DNA (846bp) protein (282aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
Phosphatidate cytidylyltransferase Tax=Thermincola potens (strain JR) RepID=D5XEZ9_THEPJ
phosphatidate cytidylyltransferase
PLM0_60_coex_redo_sep16_scaffold_5493_8
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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5673..6770
DNA (1098bp) protein (366aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLM1_NOCSJ
PLM0_60_coex_redo_sep16_scaffold_5493_9

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6767..7048
DNA (282bp) protein (94aa)
Membrane metalloprotease Tax=Fusobacterium nucleatum subsp. animalis D11 RepID=D6BGH6_FUSNU
Marine sediment metagenome DNA, contig: S06H3_C00281 {ECO:0000313|EMBL:GAH96179.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RIP metalloprotease RseP
Displaying 9 items

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