ggKbase home page

PLM0_60_coex_redo_sep16_scaffold_3767

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_3767_1
unknown

Not on your lists

2..325
DNA (324bp) protein (108aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_3767_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

322..1062
DNA (741bp) protein (247aa)
Phosphatidic acid phosphatase type 2 domain-containing protein 1B Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VUK1_9ACTO
PAP2 superfamily protein {ECO:0000313|EMBL:CDM66944.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Phosphatidic acid phosphatase type 2 domain-containing protein 1B
PLM0_60_coex_redo_sep16_scaffold_3767_3
Bacillus licheniformis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(1059..1766)
DNA (708bp) protein (236aa)
Ribosomal protein S2 Tax=Bacillus RepID=Q62RB9_BACLD
ribosomal protein S2
Ribosomal protein S2 {ECO:0000313|EMBL:AAU24691.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC; 12200 / NCIMB 9375 / NRRL NRS-1264 / Gibson 46).;"
PLM0_60_coex_redo_sep16_scaffold_3767_4
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1763..2095)
DNA (333bp) protein (111aa)
hypothetical protein Tax=Amycolatopsis methanolica RepID=UPI00037EB4F6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH96427.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM0_60_coex_redo_sep16_scaffold_3767_5
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2058..3014)
DNA (957bp) protein (319aa)
ferrochelatase (EC:4.99.1.1)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC; 27009 / DSM 446 / JCM 5260 / NBRC 15652 / NCIMB 11725 / NRRL B-14509 /; 104-1A) (Bacillus acidocaldarius).;"
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI00036A85E6
PLM0_60_coex_redo_sep16_scaffold_3767_6
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(3004..4032)
DNA (1029bp) protein (343aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Uroporphyrinogen decarboxylase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIA8_THET1
PLM0_60_coex_redo_sep16_scaffold_3767_7
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(4029..5279)
DNA (1251bp) protein (417aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PPP6_9FIRM
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM0_60_coex_redo_sep16_scaffold_3767_8
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5276..5953)
DNA (678bp) protein (226aa)
Chlorite dismutase Tax=Roseiflexus sp. (strain RS-1) RepID=A5UU34_ROSS1
chlorite dismutase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM0_60_coex_redo_sep16_scaffold_3767_9
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5950..6960)
DNA (1011bp) protein (337aa)
delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024X9_SOLUE
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM0_60_coex_redo_sep16_scaffold_3767_10
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(6953..7705)
DNA (753bp) protein (251aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003765FBD
uroporphyrinogen III synthase HEM4
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM0_60_coex_redo_sep16_scaffold_3767_11
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7702..8247)
DNA (546bp) protein (182aa)
porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SLS5_THEM7
Tax=RBG_16_RIF_CHLX_69_14_curated
Displaying 11 items

View Taxonomy