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PLM0_60_coex_redo_sep16_scaffold_3984

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_3984_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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3..689
DNA (687bp) protein (229aa)
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AZT5_FRADG
Tax=RBG_16_Actinobacteria_67_10_curated
PLM0_60_coex_redo_sep16_scaffold_3984_2
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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703..1485
DNA (783bp) protein (261aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
pantothenate kinase Tax=Desulfurispora thermophila RepID=UPI00036C1888
type III pantothenate kinase
PLM0_60_coex_redo_sep16_scaffold_3984_3
CG_Arma_02, Armatimonadetes, Bacteria

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1492..3330
DNA (1839bp) protein (613aa)
Metal dependent phosphohydrolase bin=GWC2_Methylomirabilis_70_16 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
response regulator with HD-GYP domain
Tax=CG_Arma_02
PLM0_60_coex_redo_sep16_scaffold_3984_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3327..4175
DNA (849bp) protein (283aa)
Beta-lactamase domain-containing protein Tax=Methylobacter tundripaludum SV96 RepID=G3IWY1_9GAMM
putative phytochrome sensor protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM0_60_coex_redo_sep16_scaffold_3984_5
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4195..5598
DNA (1404bp) protein (468aa)
Lysine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00252}; EC=6.1.1.6 {ECO:0000255|HAMAP-Rule:MF_00252};; Lysyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00252}; Short=LysRS {ECO:0000255|HAMAP-Rule:MF_00252};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI).;"
Lysine--tRNA ligase Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=SYK_PELTS
lysS; lysyl-tRNA synthetase
PLM0_60_coex_redo_sep16_scaffold_3984_6
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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5598..6860
DNA (1263bp) protein (421aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
seryl-tRNA synthase Tax=Alicyclobacillus pohliae RepID=UPI000369BF40
PLM0_60_coex_redo_sep16_scaffold_3984_trna_1
unknown

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6885..6973
DNA (89bp)
transferRNA Ser
PLM0_60_coex_redo_sep16_scaffold_3984_7
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7020..7310)
DNA (291bp) protein (97aa)
Transposase IS116/IS110/IS902 family protein Tax=Frankia sp. CN3 RepID=G6HB85_9ACTO
IS110 family transposase
IS110 family transposase {ECO:0000313|EMBL:CCK28781.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM0_60_coex_redo_sep16_scaffold_3984_8
Rhodococcus sp. NS1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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7747..8007
DNA (261bp) protein (87aa)
transposase IS110 Tax=Mycobacterium bovis RepID=UPI0003675986
Uncharacterized protein {ECO:0000313|EMBL:AIU93802.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. NS1.;"
transposase is116/is110/is902 family protein
Displaying 9 items

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