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PLM0_60_coex_redo_sep16_scaffold_4019

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_4019_1
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..223
DNA (222bp) protein (74aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
Phosphoenolpyruvate carboxykinase [ATP] Tax=Marichromatium purpuratum 984 RepID=F9U1X6_MARPU
PLM0_60_coex_redo_sep16_scaffold_4019_2
Synechococcus sp. PCC 7502, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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236..580
DNA (345bp) protein (115aa)
Putative Rossmann fold nucleotide-binding protein involved in DNA uptake Tax=Synechococcus sp. PCC 7502 RepID=K9STM2_9SYNE
DNA uptake Rossmann fold nucleotide-binding protein
Putative Rossmann fold nucleotide-binding protein involved in DNA uptake {ECO:0000313|EMBL:AFY73505.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7502.;"
PLM0_60_coex_redo_sep16_scaffold_4019_3
R_NC10_66_22, NC10, Bacteria

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590..1285
DNA (696bp) protein (232aa)
MoaD family protein Tax=Nitrolancetus hollandicus Lb RepID=I4EE09_9CHLR
MoaD family protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM0_60_coex_redo_sep16_scaffold_4019_4
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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comp(1282..1926)
DNA (645bp) protein (215aa)
O-methyltransferase family protein Tax=uncultured candidate division OP1 bacterium RepID=H5SRI1_9BACT
O-methyltransferase family protein {ECO:0000313|EMBL:BAL58698.1}; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
O-methyltransferase family protein
PLM0_60_coex_redo_sep16_scaffold_4019_5
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1923..3065)
DNA (1143bp) protein (381aa)
Class V aminotransferase Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MYE3_CORCM
csd; class V aminotransferase
Class V aminotransferase {ECO:0000313|EMBL:AFE08443.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
PLM0_60_coex_redo_sep16_scaffold_4019_6
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(3069..3512)
DNA (444bp) protein (148aa)
hypothetical protein
Tax=RBG_16_Chloroflexi_64_32_curated
PLM0_60_coex_redo_sep16_scaffold_4019_7
Peptococcaceae bacterium BRH_c4a, Clostridiales, Clostridia, Firmicutes, Bacteria

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3545..4168
DNA (624bp) protein (208aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4a.;"
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L3I3_9BACI
PLM0_60_coex_redo_sep16_scaffold_4019_8
unknown

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comp(4122..4466)
DNA (345bp) protein (115aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_4019_9
unknown

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comp(4454..5143)
DNA (690bp) protein (230aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_4019_10
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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comp(5173..6363)
DNA (1191bp) protein (397aa)
sur:STAUR_7280 Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
sodium/proton antiporter, CPA1 family
Tax=CG_Anaero_02
PLM0_60_coex_redo_sep16_scaffold_4019_11
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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comp(6364..7086)
DNA (723bp) protein (241aa)
beta-lactamase domain-containing protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
beta-lactamase domain-containing protein
Tax=RBG_16_Chloroflexi_60_22_curated
PLM0_60_coex_redo_sep16_scaffold_4019_12
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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comp(7098..8759)
DNA (1662bp) protein (554aa)
Probable DNA ligase bin=GWC2_Chloroflexi_73_18 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
DNA ligase I
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM0_60_coex_redo_sep16_scaffold_4019_13
unknown

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8782..8994
DNA (213bp) protein (71aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_4019_14
unknown

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8991..9347
DNA (357bp) protein (119aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_4019_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9344..10312)
DNA (969bp) protein (323aa)
DNA ligase {ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|RuleBase:RU000617};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ATP-dependent DNA ligase I (EC:6.5.1.1)
DNA ligase Tax=Pedosphaera parvula Ellin514 RepID=B9XLR7_9BACT
PLM0_60_coex_redo_sep16_scaffold_4019_16
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(10309..11019)
DNA (711bp) protein (237aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_52_11_curated
PLM0_60_coex_redo_sep16_scaffold_4019_17
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(10970..11602)
DNA (633bp) protein (211aa)
Putative transcriptional regulator Tax=Oscillochloris trichoides DG-6 RepID=E1IDT3_9CHLR
Putative transcriptional regulator {ECO:0000313|EMBL:EFO80654.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
sufR_2; iron-sulfur cluster biosynthesis transcriptional regulator SufR
PLM0_60_coex_redo_sep16_scaffold_4019_18
unknown

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11716..12030
DNA (315bp) protein (105aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_4019_19
unknown

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comp(12105..12569)
DNA (465bp) protein (155aa)

This feature has no annotations

Displaying 19 items

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