ggKbase home page

PLM0_60_coex_redo_sep16_scaffold_8703

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_8703_1
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1..477
DNA (477bp) protein (159aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
Threonine--tRNA ligase Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F4E3_9ACTN
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase
PLM0_60_coex_redo_sep16_scaffold_8703_2
unknown

Not on your lists

comp(647..1777)
DNA (1131bp) protein (377aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_8703_3
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2001..2498
DNA (498bp) protein (166aa)
Translation initiation factor IF-3 Tax=Desulfotomaculum RepID=F6B318_DESCC
translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 /; CO-1-SRB).;"
PLM0_60_coex_redo_sep16_scaffold_8703_4
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


2491..2685
DNA (195bp) protein (65aa)
50S ribosomal protein L35 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EAX5_9ACTN
LSU ribosomal protein L35P
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
PLM0_60_coex_redo_sep16_scaffold_8703_5
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists


2690..3043
DNA (354bp) protein (118aa)
50S ribosomal protein L20 Tax=Nitrolancetus hollandicus Lb RepID=I4EFW2_9CHLR
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
rplT; 50S ribosomal protein L20
PLM0_60_coex_redo_sep16_scaffold_8703_6
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

3144..3779
DNA (636bp) protein (212aa)
tRNA/rRNA methyltransferase (SpoU) Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFI0_THET1
tRNA/rRNA methyltransferase SpoU
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM0_60_coex_redo_sep16_scaffold_8703_7
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


3776..4798
DNA (1023bp) protein (341aa)
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00281}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00281};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00281}; Short=PheRS {ECO:0000255|HAMAP-Rule:MF_00281};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
Phenylalanine--tRNA ligase alpha subunit Tax=Moorella thermoacetica (strain ATCC 39073) RepID=SYFA_MOOTA
PLM0_60_coex_redo_sep16_scaffold_8703_8
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4798..5784
DNA (987bp) protein (329aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
Phenylalanine--tRNA ligase beta subunit Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q251I1_DESHY
pheT; phenylalanyl-tRNA synthetase subunit beta
Displaying 8 items

View Taxonomy