ggKbase home page

PLM0_60_coex_redo_sep16_scaffold_236_21

Organism: PLM0_60_coex_sep16_Chloroflexi_RIF-CHLX_65_9

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(20498..21694)

Top 3 Functional Annotations

Value Algorithm Source
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 381.0
  • Bit_score: 333
  • Evalue 1.90e-88
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 399.0
  • Bit_score: 312
  • Evalue 1.00e-82
Tax=CSP1_4_Chloroflexi similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 381.0
  • Bit_score: 333
  • Evalue 2.70e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_4_Chloroflexi → Gitt-GS-136 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1197
TTGTCCAATGAGTCTGGTGCTGTCCTGACCGAAAAGAAGGAGGCGCTCGAACAAGACTCAGCCTACGCGATGACCATGGAGGACTACCTCCACTACGAGGAGGAAGCCTTCAAAACCCCCAACCACGGGGACATCGTGGATGGGATCGTGGTGCGGGTCGACGCGGACGAGGTCCTCGTTGACATCGGAGCCAAGGCTGAAGGCGTCATCTCGAGCAAAGAGCTCGGCGTGCGCGGCGACCTGGACTCGGTCGGGCTCGAGCCCGGCGACCAGATCAAGGTTTATGTCCTCCAGCCGGAGAACGATGAAGGCAACGTCGTCCTCAGCCTGCGCCGGGCACGGGCAGAGACGACGTGGCTCGTGGCGGCTGAGAAGCAGGTCGACGGCTCGGTCATGGACGCGGACGTTCGCGAGCAGAACAAAGGCGGGCTGATCGTCAACATCCTCGGCCTGAGGGGCTTTCTGCCCTCGAGCCAGGTGGCGCGCGCCTACGCAGGCACCCTGGAATCTCTGGTCGGCCAGCGGATCCCCGTCAAGATCCTCGAGGTCAACCGCAAGCGCAACCGTCTGATCGTCAGCCAGAAGGCTGCCGAGGACGAGGATCGCGCGCGAAAGCGAGAGGAGCTCTTCAGCCGGCTGCAGACCGGGACCACGGTCAAGGGAACCGTTTCCGGCATCACGAGCTATGGAGCCTTCGTCGACATCGGTGGAGCCGACGGGTTGATTCACATCTCCGAGCTGTCATGGGACCGTGTCTCCAAGGTGACCGACGTCCTGCAGCTCGGCGAAGAGGTCACCGTGAAGGTGATCAAGCTCGACCCGGAACAGACAAGGATCTCGCTCTCGCTGCGGCAGCTGCAGCAGGACCCCTGGGAGCGGCTCGTCCAGTCGATGCCGATCGGCTCGATCGTCGAGGGCCAGGTGACCAAGACCAAGAAGTACGGGGCCTTCCTGCAGATCATGGCCGGAATCGAAGGGCTGCTCCACATCTCCGAGCTGTCGTGGGACCACGTCGAGCGGACCGAAGACGTGCTGAAGGTGGGGGAGACGCTCCACGTGAAGGTGATCGGGATCGACACCGCCCGTCGCCGGATCTCGTTGAGCCTGAAGCAGCTGTCGGCGCCGCCGGCCAACCTCGCGCCGGCACGCACCGAGCAGCGGGCCCCCGAATACGACGACGTCGAGGACGAGACCTAG
PROTEIN sequence
Length: 399
LSNESGAVLTEKKEALEQDSAYAMTMEDYLHYEEEAFKTPNHGDIVDGIVVRVDADEVLVDIGAKAEGVISSKELGVRGDLDSVGLEPGDQIKVYVLQPENDEGNVVLSLRRARAETTWLVAAEKQVDGSVMDADVREQNKGGLIVNILGLRGFLPSSQVARAYAGTLESLVGQRIPVKILEVNRKRNRLIVSQKAAEDEDRARKREELFSRLQTGTTVKGTVSGITSYGAFVDIGGADGLIHISELSWDRVSKVTDVLQLGEEVTVKVIKLDPEQTRISLSLRQLQQDPWERLVQSMPIGSIVEGQVTKTKKYGAFLQIMAGIEGLLHISELSWDHVERTEDVLKVGETLHVKVIGIDTARRRISLSLKQLSAPPANLAPARTEQRAPEYDDVEDET*