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PLM0_60_coex_redo_sep16_scaffold_236

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_236_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3..371)
DNA (369bp) protein (123aa)
pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] bin=THIO_HI species=Nitrosomonas eutropha genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain DSM 13855 / M31).;"
pyk; Pyruvate kinase
PLM0_60_coex_redo_sep16_scaffold_236_2
unknown

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comp(368..481)
DNA (114bp) protein (38aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_236_3
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(481..1821)
DNA (1341bp) protein (447aa)
membrane protein Tax=Streptomyces sp. BoleA5 RepID=UPI00036021A0
Peptidase M50 {ECO:0000313|EMBL:EJJ04668.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
peptidase M50
PLM0_60_coex_redo_sep16_scaffold_236_4
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1814..2572)
DNA (759bp) protein (253aa)
RNA methyltransferase, TrmH family, group 3 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I0T3_DESAP
RNA methyltransferase
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:ACA58754.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
PLM0_60_coex_redo_sep16_scaffold_236_5
RLO_RIF05_58_11, RIF5, Bacteria

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comp(2554..3966)
DNA (1413bp) protein (471aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003762C01
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM0_60_coex_redo_sep16_scaffold_236_6
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3963..4436)
DNA (474bp) protein (158aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000255|HAMAP-Rule:MF_00107}; Short=MECDP-synthase {ECO:0000255|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000255|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000255|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000255|HAMAP-Rule:MF_00107};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen).;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=ISPF_SYNWW
PLM0_60_coex_redo_sep16_scaffold_236_7
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(4433..5122)
DNA (690bp) protein (230aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] bin=bin9_gal15 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
Tax=CSP1_3_Armatimonadetes
PLM0_60_coex_redo_sep16_scaffold_236_8
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5119..6201)
DNA (1083bp) protein (361aa)
PilT protein domain protein Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DS18_9BACL
PilT protein domain protein {ECO:0000313|EMBL:EED07062.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius LAA1.;"
PilT protein-like protein
PLM0_60_coex_redo_sep16_scaffold_236_9
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(6213..7628)
DNA (1416bp) protein (472aa)
DNA repair protein RadA (EC:2.1.1.63)
DNA repair protein radA Tax=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) RepID=B9LIV6_CHLSY
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
PLM0_60_coex_redo_sep16_scaffold_236_10
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7807..8760
DNA (954bp) protein (318aa)
hypothetical protein Tax=Rudanella lutea RepID=UPI000377048B
Uncharacterized protein {ECO:0000313|EMBL:KJH69821.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
Pyridoxal-5'-phosphate-dependent protein beta subunit
PLM0_60_coex_redo_sep16_scaffold_236_11
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(8754..9515)
DNA (762bp) protein (254aa)
RDD domain-containing protein Tax=Oscillochloris trichoides DG-6 RepID=E1ICJ5_9CHLR
RDD domain-containing protein {ECO:0000313|EMBL:EFO81123.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
RDD domain-containing protein
PLM0_60_coex_redo_sep16_scaffold_236_12
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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9556..10518
DNA (963bp) protein (321aa)
Putative uncharacterized protein Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NI82_ROSCS
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM0_60_coex_redo_sep16_scaffold_236_13
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(10485..11807)
DNA (1323bp) protein (441aa)
Putative uncharacterized protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUC2_ROSS1
hypothetical protein
Tax=BJP_IG2157_Anaerolineales_55_23
PLM0_60_coex_redo_sep16_scaffold_236_14
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(11812..12777)
DNA (966bp) protein (322aa)
ATPase Tax=Oscillochloris trichoides DG-6 RepID=E1IDD3_9CHLR
ATPase {ECO:0000313|EMBL:EFO80810.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
ATPase
PLM0_60_coex_redo_sep16_scaffold_236_15
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(12777..13904)
DNA (1128bp) protein (376aa)
Putative uncharacterized protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUB9_ROSS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ90222.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM0_60_coex_redo_sep16_scaffold_236_16
unknown

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comp(13901..14791)
DNA (891bp) protein (297aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_236_17
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14826..15599)
DNA (774bp) protein (258aa)
hypothetical protein Tax=Nocardiopsis sp. CNS639 RepID=UPI0003628FD5
Uncharacterized protein {ECO:0000313|EMBL:KJK33064.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
integral membrane protein
PLM0_60_coex_redo_sep16_scaffold_236_18
GWB1_OP11_45_5_curated, Microgenomates, Bacteria

Not on your lists

15760..16158
DNA (399bp) protein (133aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00037F4E13
hypothetical protein
Tax=GWB1_OP11_45_5_curated
PLM0_60_coex_redo_sep16_scaffold_236_19
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(16182..18677)
DNA (2496bp) protein (832aa)
ClpC ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
ClpA; ATPase with chaperone activity, ATP-binding subunit
Tax=CSP1_4_Chloroflexi
PLM0_60_coex_redo_sep16_scaffold_236_20
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18813..20396
DNA (1584bp) protein (528aa)
Uncharacterized protein Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XP10_DESMR
Uncharacterized protein {ECO:0000313|EMBL:KHK02814.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hypothetical protein
PLM0_60_coex_redo_sep16_scaffold_236_21
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(20498..21694)
DNA (1197bp) protein (399aa)
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
Tax=CSP1_4_Chloroflexi
PLM0_60_coex_redo_sep16_scaffold_236_22
unknown

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comp(21787..21948)
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying 22 items

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