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PLM0_60_coex_redo_sep16_scaffold_3189_2

Organism: PLM0_60_coex_sep16_Chloroflexi_RIF-CHLX_65_9

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 941..1549

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, sigma-E family Tax=Frankia sp. QA3 RepID=I8QHC0_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 182.0
  • Bit_score: 98
  • Evalue 6.90e-18
RNA polymerase sigma-70 factor, sigma-E family {ECO:0000313|EMBL:EIV91707.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.0
  • Coverage: 182.0
  • Bit_score: 98
  • Evalue 9.70e-18
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 164.0
  • Bit_score: 89
  • Evalue 9.10e-16

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Taxonomy

Frankia sp. QA3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGGCCGAGAGGATTCCCGTAGGCGGTGAGACATCCGATGCGGCGACTTCATATGAGCCGGGGAACGAAGCGGATTTCGAGCGCCTTTACCAAACGTCATACGGCAGGATCCTCCGCACGCTGACCGCGCTGCTTGGGGATCGGGCTGCCGCGGAGGACCTGACCCAGGATGCTTTCGAGCGGGCTTATAAGAAGTGGCCCACCTTTCAGCCGATCGCTCCCGCCGAGGCATGGGTTCATCGCATCGCGATCAACGCCGCGATCTCATATCAACGAAAGATGCGCATCCGCGAGGTCGGTGAGGTGATCCGTAGGATCGGCCGGCCCAATCTGGCAGCGGATCCGCAGGAGTTCGTCGAGAGTCGCGACCTGGCAAACGCGCTGGCCCAACTGCCTCCCAAGCAGGCAGCAGCGATCGTCCTTCGCTATTACCACGGCTACACCAACCGGGCGATCGCCCACAGCCTAGGCACGCCGGAACGCACAGTCGCCTCACGCATGGGAGTCGCCAGAGTGCGGCTGCGCGCGATGCTGAAGTACTCCTACGGCCCGGAGGCTCATATGGATCACTACACCGCCAAACCTGGGCTGACTCCCGCGGCCGGCTGA
PROTEIN sequence
Length: 203
MAERIPVGGETSDAATSYEPGNEADFERLYQTSYGRILRTLTALLGDRAAAEDLTQDAFERAYKKWPTFQPIAPAEAWVHRIAINAAISYQRKMRIREVGEVIRRIGRPNLAADPQEFVESRDLANALAQLPPKQAAAIVLRYYHGYTNRAIAHSLGTPERTVASRMGVARVRLRAMLKYSYGPEAHMDHYTAKPGLTPAAG*