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PLM1_60_coex_sep16_scaffold_29892

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_29892_1
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(169..453)
DNA (285bp) protein (95aa)
30S ribosomal protein S19 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGB0_9FIRM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
rpsS; 30S ribosomal protein S19
PLM1_60_coex_sep16_scaffold_29892_2
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(482..1306)
DNA (825bp) protein (275aa)
50S ribosomal protein L2 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=RL2_HALOH
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000255|HAMAP-Rule:MF_01320}; species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562).;"
PLM1_60_coex_sep16_scaffold_29892_3
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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comp(1323..1613)
DNA (291bp) protein (97aa)
50S ribosomal protein L23 Tax=Desulfotomaculum reducens (strain MI-1) RepID=RL23_DESRM
rplW; 50S ribosomal protein L23
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM1_60_coex_sep16_scaffold_29892_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1610..2110)
DNA (501bp) protein (167aa)
50S ribosomal protein L4 bin=GWD2_Nitrospirae-related_57_8 species=Eubacterium plexicaudatum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
50S ribosomal protein L4P
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_60_coex_sep16_scaffold_29892_5
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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comp(2210..2833)
DNA (624bp) protein (208aa)
50S ribosomal protein L3 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2K5_SPHTD
50S ribosomal protein L3
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM1_60_coex_sep16_scaffold_29892_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2866..3180)
DNA (315bp) protein (105aa)
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
PLM1_60_coex_sep16_scaffold_29892_7
bacterium UASB270, Bacteria

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comp(3299..3976)
DNA (678bp) protein (226aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHU1_CHLTF
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria.;" source="bacterium UASB270.;"
Displaying 7 items

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