ggKbase home page

PLM1_60_coex_sep16_scaffold_50396

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_50396_1
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..267
DNA (267bp) protein (89aa)
5-10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
5-10-methenyltetrahydrofolate synthetase Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VNX1_CLOSH
PLM1_60_coex_sep16_scaffold_50396_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

325..1647
DNA (1323bp) protein (441aa)
Ribonuclease Y Tax=Megasphaera RepID=S7J0G8_9FIRM
hypothetical protein
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
PLM1_60_coex_sep16_scaffold_50396_3
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1595..1834
DNA (240bp) protein (80aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
ribonuclease Tax=Cohnella laeviribosi RepID=UPI000374DB22
2'3'-cyclic-nucleotide 2'-phosphodiesterase
PLM1_60_coex_sep16_scaffold_50396_4
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1918..2637
DNA (720bp) protein (240aa)
Putative Sir2 family protein Tax=uncultured marine microorganism HF4000_APKG5H11 RepID=B3T8H4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:ETW96344.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
NAD-dependent deacetylase
PLM1_60_coex_sep16_scaffold_50396_5
unknown

Not on your lists

2708..2854
DNA (147bp) protein (49aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_50396_6
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2895..3329
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Cupriavidus basilensis OR16 RepID=H1S4I2_9BURK
Transporter {ECO:0000313|EMBL:KDP88117.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
hypothetical protein
PLM1_60_coex_sep16_scaffold_50396_7
unknown

Not on your lists

comp(3343..3408)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 7 items

View Taxonomy