ggKbase home page

PLM1_60_coex_sep16_scaffold_5833

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_5833_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1..1347
DNA (1347bp) protein (449aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
fimbrial assembly family protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_5833_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1350..2414
DNA (1065bp) protein (355aa)
General secretion pathway protein bin=GWC2_Methylomirabilis_70_16 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
General secretion pathway M protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_5833_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2411..4579
DNA (2169bp) protein (723aa)
General secretion pathway protein D bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
general secretion pathway protein d
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_coex_sep16_scaffold_5833_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4787..6799
DNA (2013bp) protein (671aa)
ligA; DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) (EC:6.5.1.2) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ligA; DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) (EC:6.5.1.2)
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_5833_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6796..7458
DNA (663bp) protein (221aa)
Tetratricopeptide TPR_2 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_5833_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7507..8202
DNA (696bp) protein (232aa)
Probable transferase protein bin=GWC2_Methylomirabilis_70_24 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative transferase protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_5833_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8231..8668
DNA (438bp) protein (146aa)
GCN5-related N-acetyltransferase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_5833_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8700..9155
DNA (456bp) protein (152aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_5833_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9155..9280
DNA (126bp) protein (42aa)
Major facilitator superfamily MFS_1 bin=GWC2_Methylomirabilis_70_16 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 9 items

View Taxonomy