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PLM1_60_coex_sep16_scaffold_1430

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_1430_1
unknown

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3..86
DNA (84bp) protein (28aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_1430_2
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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120..1139
DNA (1020bp) protein (340aa)
GTPase obg bin=GWA2_Elusimicrobia_69_24 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
GTPase obg
Tax=GWA2_Elusimicrobia_69_24_curated
PLM1_60_coex_sep16_scaffold_1430_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1118..2242
DNA (1125bp) protein (375aa)
Glutamate 5-kinase bin=GWC2_Methylomirabilis_70_16 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
gamma-glutamyl kinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1430_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2287..3543
DNA (1257bp) protein (419aa)
proA; gamma-glutamylphosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase bin=GWC2_Methylomirabilis_70_16 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1430_5
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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3611..4195
DNA (585bp) protein (195aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:3.5.4.4)
Probable nicotinate-nucleotide adenylyltransferase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Elusimicrobia_69_24_curated
PLM1_60_coex_sep16_scaffold_1430_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4195..4563
DNA (369bp) protein (123aa)
Iojap-related protein bin=GWC2_Methylomirabilis_70_16 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Iojap-related protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1430_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4633..4998
DNA (366bp) protein (122aa)
Transcriptional regulators, TraR/DksA family bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transcriptional regulators, TraR/DksA family
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1430_8
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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5022..6047
DNA (1026bp) protein (342aa)
Tetratricopeptide TPR_2 bin=GWA2_Elusimicrobia_69_24 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
PLM1_60_coex_sep16_scaffold_1430_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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6133..6744
DNA (612bp) protein (204aa)
Amidophosphoribosyltransferase, putative bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
competence protein F
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1430_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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6853..7857
DNA (1005bp) protein (335aa)
cbbG; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1430_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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7886..9073
DNA (1188bp) protein (396aa)
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase bin=GWC2_Methylomirabilis_70_16 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1430_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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9073..9852
DNA (780bp) protein (260aa)
Triosephosphate isomerase bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
tpi; triosephosphate isomerase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1430_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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9862..10206
DNA (345bp) protein (115aa)
SecG bin=GWF2_Methylomirabilis_70_14 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
secG; preprotein translocase subunit SecG
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1430_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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10219..11883
DNA (1665bp) protein (555aa)
Oligopeptide-binding protein bin=GWC2_Methylomirabilis_70_16 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
oligopeptide-binding protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1430_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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11884..12876
DNA (993bp) protein (331aa)
Binding-protein-dependent transport systems inner membrane component bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_60_coex_sep16_scaffold_1430_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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12878..13771
DNA (894bp) protein (298aa)
Peptide ABC transporter, membrane protein bin=GWF2_Methylomirabilis_70_14 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter membrane protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1430_trna_1
unknown

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13921..14002
DNA (82bp)
transferRNA Leu
PLM1_60_coex_sep16_scaffold_1430_17
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14086..14796)
DNA (711bp) protein (237aa)
Peptide aspartate b-dioxygenase Tax=Legionella pneumophila RepID=I7HWK5_LEGPN
hypothetical protein
Aspartyl/Asparaginyl beta-hydroxylase {ECO:0000313|EMBL:GAN27802.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila.;"
PLM1_60_coex_sep16_scaffold_1430_18
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(14802..15035)
DNA (234bp) protein (78aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Phospho-2-dehydro-3-deoxyheptonate aldolase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXF1_RUBXD
PLM1_60_coex_sep16_scaffold_1430_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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15060..15269
DNA (210bp) protein (70aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 20 items

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