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PLM1_60_coex_sep16_scaffold_1611

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_1611_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3..887)
DNA (885bp) protein (295aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
2-hydroxy-3-oxopropionate reductase bin=GWC2_Methylomirabilis_70_24 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1611_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(884..1420)
DNA (537bp) protein (179aa)
Endoribonuclease L-PSP bin=GWA2_Methylomirabilis_73_35 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
translation initiation inhibitor
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1611_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1584..2771
DNA (1188bp) protein (396aa)
ABC-type branched-chain amino acid transport system, periplasmic component bin=GWF2_Methylomirabilis_70_14 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1611_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2864..3742
DNA (879bp) protein (293aa)
Inner-membrane translocator bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter permease
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1611_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3739..4659
DNA (921bp) protein (307aa)
ABC-type transport system permease protein II (Probable substrates branched-chain/neutral amino acids) 2 bin=GWF2_Methylomirabilis_70_14 species=Marinobacter sp. ELB17 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1611_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4664..5368
DNA (705bp) protein (235aa)
ABC transport system protein bin=GWC2_Methylomirabilis_70_16 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1611_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5346..6821
DNA (1476bp) protein (492aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1611_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6799..7458
DNA (660bp) protein (220aa)
Methyltransferase type 12 bin=GWC2_Methylomirabilis_70_24 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
type 12 methyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1611_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7455..8183
DNA (729bp) protein (243aa)
Branched-chain amino acid transport system ATP-binding protein bin=GWC2_Methylomirabilis_70_16 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1611_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8243..9334
DNA (1092bp) protein (364aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cytochrome c
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1611_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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9427..10170
DNA (744bp) protein (248aa)
Abortive infection protein bin=GWA2_Methylomirabilis_73_35 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
abortive infection protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 11 items

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