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PLM1_60_coex_sep16_scaffold_6994

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_6994_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3..1001)
DNA (999bp) protein (333aa)
Lipid A export ATP-binding/permease protein MsbA bin=GWC2_Methylomirabilis_70_16 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_6994_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(998..2104)
DNA (1107bp) protein (369aa)
Glycosyl transferase, group 1 bin=GWF2_Methylomirabilis_70_14 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase family protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_6994_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2140..3222)
DNA (1083bp) protein (361aa)
DegT/DnrJ/EryC1/StrS aminotransferase bin=GWC2_Methylomirabilis_70_24 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
DegT/DnrJ/EryC1/StrS aminotransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_6994_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(3241..3735)
DNA (495bp) protein (165aa)
flavin reductase domain-containing protein bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM1_60_coex_sep16_scaffold_6994_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4443..5111
DNA (669bp) protein (223aa)
Mrp bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_6994_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5117..5755
DNA (639bp) protein (213aa)
ATP-dependent protease La bin=GWC2_Methylomirabilis_70_24 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
lon3; ATP-dependent protease La
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_6994_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5752..6444
DNA (693bp) protein (231aa)
protease Do (EC:3.4.21.108)
Protease Do bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_6994_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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6567..7703
DNA (1137bp) protein (379aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_60_coex_sep16_scaffold_6994_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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7784..7954
DNA (171bp) protein (57aa)
Putative membrane protein bin=GWA2_Methylomirabilis_73_35 species=Sinorhizobium fredii genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transporter dctQ-like transmembrane protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 9 items

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