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PLM1_60_coex_sep16_scaffold_11034

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_11034_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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2..124
DNA (123bp) protein (41aa)
amino acid/amide ABC transporter substrate-binding protein, HAAT family bin=bin7_NC10_sister species=Afipia sp. 1NLS2 genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_60_coex_sep16_scaffold_11034_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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219..923
DNA (705bp) protein (235aa)
ABC transporter related bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter ATP-binding protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_11034_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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923..1246
DNA (324bp) protein (108aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC-type branched-chain amino acid transport systems, ATPase component
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_11034_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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1246..1674
DNA (429bp) protein (143aa)
ABC transporter related protein bin=GWC2_Methylomirabilis_70_24 species=Afipia sp. 1NLS2 genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched-chain amino acid ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_60_coex_sep16_scaffold_11034_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1678..2541
DNA (864bp) protein (288aa)
Inner-membrane translocator bin=GWC2_Methylomirabilis_70_16 species=Halorubrum saccharovorum genus=Halorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_11034_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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2547..3500
DNA (954bp) protein (318aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein bin=bin7_NC10_sister species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
amino acid/amide ABC transporter membrane protein 2, HAAT family
Tax=CSP1_6_Rokubacteria
PLM1_60_coex_sep16_scaffold_11034_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3540..3992)
DNA (453bp) protein (151aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
deoxyuridine 5'-triphosphate nucleotidohydrolase dut
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_coex_sep16_scaffold_11034_8
unknown

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4270..4593
DNA (324bp) protein (108aa)

This feature has no annotations

Displaying 8 items

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