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PLM1_60_coex_sep16_scaffold_3196

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_3196_1
unknown

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1..153
DNA (153bp) protein (51aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_3196_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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425..1951
DNA (1527bp) protein (509aa)
RNA polymerase sigma factor bin=GWC2_Methylomirabilis_70_24 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
sigma 38, RpoS
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3196_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2034..2870)
DNA (837bp) protein (279aa)
Putative N5,N10-methylenetetrahydromethanopterin reductase-related protein bin=GWC2_Methylomirabilis_70_24 species=marine gamma proteobacterium HTCC2143 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
oxidoreductase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3196_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2946..3449)
DNA (504bp) protein (168aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Desulfosporosinus orientis genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DinB family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_coex_sep16_scaffold_3196_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3473..3688)
DNA (216bp) protein (72aa)
Biotin/lipoyl attachment domain-containing protein bin=GWC2_Methylomirabilis_70_16 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
biotin/lipoyl attachment domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_3196_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3770..4921)
DNA (1152bp) protein (384aa)
Acyl-CoA dehydrogenase domain protein bin=GWC2_Methylomirabilis_70_16 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_60_coex_sep16_scaffold_3196_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4930..5706)
DNA (777bp) protein (259aa)
Enoyl-CoA hydratase bin=GWA2_Methylomirabilis_73_35 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
enoyl-CoA hydratase/isomerase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_60_coex_sep16_scaffold_3196_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(5733..6347)
DNA (615bp) protein (205aa)
Short-chain dehydrogenase/reductase SDR bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_60_coex_sep16_scaffold_3196_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(6638..6850)
DNA (213bp) protein (71aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.1)
Carbamoyl-phosphate synthase L chain ATP-binding protein bin=GWF2_Methylomirabilis_70_14 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 9 items

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