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PLM1_60_coex_sep16_scaffold_3200

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_3200_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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39..359
DNA (321bp) protein (107aa)
30S ribosomal protein S10 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S10
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3200_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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514..1194
DNA (681bp) protein (227aa)
50S ribosomal protein L3 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rplC; 50S ribosomal protein L3
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_3200_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1196..1822
DNA (627bp) protein (209aa)
50S ribosomal protein L4 bin=GWC2_Methylomirabilis_70_24 species=Alicyclobacillus hesperidum genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
50S ribosomal protein L4
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3200_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1819..2109
DNA (291bp) protein (97aa)
50S ribosomal protein L23 bin=GWC2_Methylomirabilis_70_16 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
50S ribosomal protein L25/L23
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3200_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


2114..2941
DNA (828bp) protein (276aa)
50S ribosomal protein L2 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rplB; 50S ribosomal protein L2
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3200_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2957..3250
DNA (294bp) protein (98aa)
SSU ribosomal protein S19p (S15e) bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsS; 30S ribosomal protein S19
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_coex_sep16_scaffold_3200_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


3253..3630
DNA (378bp) protein (126aa)
50S ribosomal protein L22 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rplV; 50S ribosomal protein L22
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3200_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


3633..4283
DNA (651bp) protein (217aa)
30S ribosomal protein S3 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
30S ribosomal protein S3
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3200_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


4290..4706
DNA (417bp) protein (139aa)
50S ribosomal protein L16 bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rplP; 50S ribosomal protein L16
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_3200_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


4722..4928
DNA (207bp) protein (69aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
50S ribosomal protein L29
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_coex_sep16_scaffold_3200_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


4950..5198
DNA (249bp) protein (83aa)
30S ribosomal protein S17 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S17
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3200_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


5195..5563
DNA (369bp) protein (123aa)
50S ribosomal protein L14 bin=GWF2_Methylomirabilis_70_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplN; 50S ribosomal protein L14
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3200_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


5574..5900
DNA (327bp) protein (109aa)
50S ribosomal protein L24 bin=GWC2_Methylomirabilis_70_16 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
50S ribosomal protein L24
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_3200_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


5908..6369
DNA (462bp) protein (154aa)
50S ribosomal protein L5 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rplE; 50S ribosomal protein L5
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 14 items

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