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PLM1_60_coex_sep16_scaffold_4091

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_4091_trna_2
unknown

Not on your lists

comp(15..104)
DNA (90bp)
transferRNA Tyr
PLM1_60_coex_sep16_scaffold_4091_trna_1
unknown

Not on your lists

comp(142..214)
DNA (73bp)
transferRNA Thr
PLM1_60_coex_sep16_scaffold_4091_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(268..2379)
DNA (2112bp) protein (704aa)
Cysteine--tRNA ligase bin=GWC2_Methylomirabilis_70_24 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cysS; cysteinyl-tRNA synthetase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_4091_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2379..2861)
DNA (483bp) protein (161aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase bin=GWC2_Methylomirabilis_70_16 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
IspF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_4091_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2858..3541)
DNA (684bp) protein (228aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase bin=GWC2_Methylomirabilis_70_16 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_4091_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3538..4548)
DNA (1011bp) protein (337aa)
PilT protein domain protein bin=GWC2_Methylomirabilis_70_24 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_4091_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4556..5923)
DNA (1368bp) protein (456aa)
DNA repair protein radA bin=GWF2_Methylomirabilis_70_14 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
radA; DNA repair protein RadA
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_4091_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(5923..6879)
DNA (957bp) protein (319aa)
ABC transport system substrate-binding protein bin=GWC2_Methylomirabilis_70_16 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Mce family protein
Tax=CSP1_6_Rokubacteria
Displaying 8 items

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