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PLM1_60_coex_sep16_scaffold_4852

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_4852_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3..1466
DNA (1464bp) protein (488aa)
ABC transporter substrate-binding protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter substrate-binding protein
Tax=CSP1_6_Rokubacteria
PLM1_60_coex_sep16_scaffold_4852_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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1586..2539
DNA (954bp) protein (318aa)
gsiC; glutathione transport system permease GsiC; K02033 peptide/nickel transport system permease protein bin=bin7_NC10_sister species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
gsiC; glutathione transport system permease GsiC
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_60_coex_sep16_scaffold_4852_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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2608..3516
DNA (909bp) protein (303aa)
uncharacterized LOC100637730 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
gsiD; glutathione transport system permease GsiD
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_60_coex_sep16_scaffold_4852_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3615..3881
DNA (267bp) protein (89aa)
Ferredoxin bin=GWF2_Methylomirabilis_70_14 species=Nocardioidaceae bacterium Broad-1 genus=unknown taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative 7Fe ferredoxin
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_60_coex_sep16_scaffold_4852_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4069..4413
DNA (345bp) protein (115aa)
Sigma-54 dependent transcriptional regulator, Fis family bin=GWC2_Methylomirabilis_70_24 species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_4852_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4454..5518
DNA (1065bp) protein (355aa)
Acetyl-CoA acetyltransferase-like protein bin=GWF2_Methylomirabilis_70_14 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Acetyl-CoA acetyltransferase-like protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_4852_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5518..5946
DNA (429bp) protein (143aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_4852_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5933..7195
DNA (1263bp) protein (421aa)
CaiB/BaiF family protein bin=bin7_NC10_sister species=Bordetella bronchiseptica genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
CaiB/BaiF family protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_4852_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(7223..7966)
DNA (744bp) protein (248aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_coex_sep16_scaffold_4852_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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8009..9598
DNA (1590bp) protein (530aa)
alpha-isopropylmalate/homocitrate synthase family transferase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] bin=bin7_NC10_sister species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
cimA; citramalate synthase
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 10 items

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