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PLM1_60_coex_sep16_scaffold_2060

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_2060_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3..149
DNA (147bp) protein (49aa)
Major facilitator superfamily MFS_1 bin=GWC2_Methylomirabilis_70_16 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2060_2
R_NC10_66_22, NC10, Bacteria

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234..1112
DNA (879bp) protein (293aa)
cytochrome c Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI0002893947
cytochrome c
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM1_60_coex_sep16_scaffold_2060_3
R_NC10_66_22, NC10, Bacteria

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1174..1665
DNA (492bp) protein (164aa)
Cytochrome c, class II Tax=alpha proteobacterium BAL199 RepID=A8TMV7_9PROT
cytochrome C
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM1_60_coex_sep16_scaffold_2060_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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1759..2877
DNA (1119bp) protein (373aa)
adenylate/guanylate cyclase bin=bin7_NC10_sister species=Desulfotignum phosphitoxidans genus=Desulfotignum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
family 3 adenylate cyclase
Tax=CSP1_6_Rokubacteria
PLM1_60_coex_sep16_scaffold_2060_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3038..3682)
DNA (645bp) protein (215aa)
RlpA-like lipoprotein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rare lipoprotein A
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_60_coex_sep16_scaffold_2060_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3900..4097
DNA (198bp) protein (66aa)
id=3773170 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2060_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4104..4931
DNA (828bp) protein (276aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
transport-associated protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2060_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(4936..6132)
DNA (1197bp) protein (399aa)
Protease Do bin=GWC2_Methylomirabilis_70_24 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
peptidase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_2060_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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6222..7097
DNA (876bp) protein (292aa)
Peptidase M56 BlaR1 bin=GWA2_Methylomirabilis_73_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SARP family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_coex_sep16_scaffold_2060_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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7225..7599
DNA (375bp) protein (125aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWC2_Methylomirabilis_70_16 species=Citrobacter freundii genus=Citrobacter taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Fis family transcriptional regulator
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_2060_11
unknown

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comp(7776..7847)
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 11 items

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