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PLM3-1_170_b2_sep16_scaffold_6416

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_6416_1
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(3..1151)
DNA (1149bp) protein (383aa)
3-hydroxy-3-methylglutaryl-coenzyme A reductase Tax=Thaumarchaeota archaeon N4 RepID=V6ARP4_9ARCH
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hydroxymethylglutaryl-CoA reductase, degradative
PLM3-1_170_b2_sep16_scaffold_6416_2

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comp(1153..2244)
DNA (1092bp) protein (364aa)
Putative uncharacterized protein Tax=uncultured marine crenarchaeote HF4000_ANIW141N1 RepID=B3T641_9ARCH
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:AIF24063.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT1000_23_E11.;"
Glucose sorbosone dehydrogenase
PLM3-1_170_b2_sep16_scaffold_6416_3
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2508..3830)
DNA (1323bp) protein (441aa)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS {ECO:0000256|HAMAP-Rule:MF_01892}; Short=tRNA(Ile2)-agm2C synthetase {ECO:0000256|HAMAP-Rule:MF_01892};; EC=6.3.4.22 {ECO:0000256|HAMAP-Rule:MF_01892};; tRNA(Ile2) agmatidine synthetase {ECO:0000256|HAMAP-Rule:MF_01892}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYN5_9ARCH
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_6416_4

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comp(3820..4056)
DNA (237bp) protein (79aa)
Regulatory protein, AsnC/Lrp family Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N314_9ARCH
Transcriptional regulator AsnC family {ECO:0000313|EMBL:AIF16176.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_72_H08.;"
regulatory protein, AsnC/Lrp family
PLM3-1_170_b2_sep16_scaffold_6416_5
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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4141..5067
DNA (927bp) protein (309aa)
Diphthamide biosynthesis domain protein Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D1R4_9ARCH
Diphthamide biosynthesis domain protein {ECO:0000313|EMBL:EIJ65657.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus salaria BD31.;"
Diphthamide biosynthesis domain protein
PLM3-1_170_b2_sep16_scaffold_6416_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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5101..5652
DNA (552bp) protein (184aa)
RNA-binding protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
RNA-binding protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_6416_7
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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5658..6473
DNA (816bp) protein (272aa)
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase {ECO:0000313|EMBL:ABX13463.1}; EC=4.2.1.51 {ECO:0000313|EMBL:ABX13463.1};; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SCM1).;"
Prephenate dehydratase Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5Y5_NITMS
PLM3-1_170_b2_sep16_scaffold_6416_8
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(6470..6934)
DNA (465bp) protein (155aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AQS9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05091.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_6416_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(6972..8405)
DNA (1434bp) protein (478aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.37); K00088 IMP dehydrogenase [EC:1.1.1.205] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
inosine-5'-monophosphate dehydrogenase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_6416_10

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comp(8436..9254)
DNA (819bp) protein (273aa)
Dihydropteroate synthase (FolP) {ECO:0000313|EMBL:AIF18531.1}; EC=2.5.1.15 {ECO:0000313|EMBL:AIF18531.1};; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_83_D12.;"
hypothetical protein Tax=cellular organisms RepID=UPI00037E2DEF
Dihydropteroate synthase
PLM3-1_170_b2_sep16_scaffold_6416_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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9343..10080
DNA (738bp) protein (246aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_6416_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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10124..10531
DNA (408bp) protein (136aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_6416_13
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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10648..12171
DNA (1524bp) protein (508aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
guaA; GMP synthetase (glutamine aminotransferase) (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KNJ8_9ARCH
PLM3-1_170_b2_sep16_scaffold_6416_14
unknown

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comp(12155..12268)
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying 14 items

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