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PLM3-1_170_b2_sep16_scaffold_92

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_92_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2..391)
DNA (390bp) protein (130aa)
asnB1; asparagine synthase (EC:6.3.5.4)
Putative asparagine synthase {ECO:0000313|EMBL:AFU57531.1}; EC=6.3.5.4 {ECO:0000313|EMBL:AFU57531.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative asparagine synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8C8_NITGG
PLM3-1_170_b2_sep16_scaffold_92_2
Marine Group I thaumarchaeote SCGC RSA3, Thaumarchaeota, Archaea

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comp(563..2050)
DNA (1488bp) protein (496aa)
Radical SAM domain protein Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A154_NITMS
radical SAM protein
Radical SAM protein {ECO:0000313|EMBL:KFM20242.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC RSA3.;"
PLM3-1_170_b2_sep16_scaffold_92_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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2197..2967
DNA (771bp) protein (257aa)
transcriptional regulator TrmB bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
transcriptional regulator TrmB
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_92_4
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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3009..3425
DNA (417bp) protein (139aa)
DtxR family iron dependent repressor Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KN19_9ARCH
DtxR family iron dependent repressor {ECO:0000313|EMBL:EGG41252.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
Iron dependent repressor, N-terminal DNA binding domain protein
PLM3-1_170_b2_sep16_scaffold_92_5
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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3467..3622
DNA (156bp) protein (52aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AUE9_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDI06501.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
PLM3-1_170_b2_sep16_scaffold_92_6
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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comp(3623..4042)
DNA (420bp) protein (140aa)
Putative cytoplasmic protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CY62_9ARCH
secondary thiamine-phosphate synthase enzyme
Secondary thiamine-phosphate synthase enzyme {ECO:0000313|EMBL:AJA92455.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
PLM3-1_170_b2_sep16_scaffold_92_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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4221..4643
DNA (423bp) protein (141aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_92_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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4691..5740
DNA (1050bp) protein (350aa)
eRF1 domain-containing protein; K06965 protein pelota bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
mRNA surveillance protein pelota
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_92_9
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(5733..6044)
DNA (312bp) protein (104aa)
Divalent-cation tolerance protein CutA Tax=Thaumarchaeota archaeon N4 RepID=V6AV74_9ARCH
Divalent-cation tolerance protein CutA {ECO:0000313|EMBL:CDI06505.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
cutA; Divalent-cation tolerance protein CutA
PLM3-1_170_b2_sep16_scaffold_92_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6137..7291
DNA (1155bp) protein (385aa)
Peptidase, M50 family (EC:3.4.24.-)
peptidase M50 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_92_11
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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7322..8266
DNA (945bp) protein (315aa)
PP-loop domain-containing protein Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B672_9ARCH
PP-loop domain-containing protein
PP-loop domain-containing protein {ECO:0000313|EMBL:AFS79981.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
PLM3-1_170_b2_sep16_scaffold_92_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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8642..8974
DNA (333bp) protein (111aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_92_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(8971..9249)
DNA (279bp) protein (93aa)
acyP; Acylphosphatase (EC:3.6.1.7)
acylphosphatase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_92_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9299..10045)
DNA (747bp) protein (249aa)
ribosomal protein L2; K02886 large subunit ribosomal protein L2 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
rpl2p; 50S ribosomal protein L2
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_92_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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10150..12351
DNA (2202bp) protein (734aa)
ATPase AAA bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
ATPase AAA
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_92_16

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12384..13673
DNA (1290bp) protein (430aa)
gatD; Glutamyl-tRNA(Gln) amidotransferase subunit D (EC:6.3.5.-)
Uncharacterized protein {ECO:0000313|EMBL:KKL69825.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glutamyl-tRNA(Gln) amidotransferase subunit D bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
PLM3-1_170_b2_sep16_scaffold_92_17
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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13706..15604
DNA (1899bp) protein (633aa)
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000256|HAMAP-Rule:MF_00588}; Short=Glu-ADT subunit E {ECO:0000256|HAMAP-Rule:MF_00588};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00588};; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
gatE; Glutamyl-tRNA(Gln) amidotransferase subunit E (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit E Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2ESJ9_9ARCH
PLM3-1_170_b2_sep16_scaffold_92_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(15714..15971)
DNA (258bp) protein (86aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_92_trna_1
unknown

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comp(16037..16121)
DNA (85bp)
transferRNA Leu
PLM3-1_170_b2_sep16_scaffold_92_19
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(16132..16698)
DNA (567bp) protein (189aa)
NT5C domain containing protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CY49_9ARCH
NT5C domain containing protein {ECO:0000313|EMBL:EGP92827.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_92_20
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(16695..17795)
DNA (1101bp) protein (367aa)
Chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK Tax=Thaumarchaeota archaeon N4 RepID=V6AVH9_9ARCH
dnaJ; chaperone Hsp40, co-chaperone with DnaK
Chaperone Hsp40, co-chaperone with DnaK {ECO:0000313|EMBL:AJM91345.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
PLM3-1_170_b2_sep16_scaffold_92_21
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(17838..19679)
DNA (1842bp) protein (614aa)
Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) Tax=Thaumarchaeota archaeon N4 RepID=V6AVE1_9ARCH
dnaK; chaperone Hsp70, co-chaperone with DnaJ
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
PLM3-1_170_b2_sep16_scaffold_92_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(19672..20235)
DNA (564bp) protein (188aa)
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Protein GrpE
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_92_23
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(20272..21408)
DNA (1137bp) protein (379aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_92_24
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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21528..22505
DNA (978bp) protein (326aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_92_25
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(22710..22946)
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BCC9_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJM92642.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
PLM3-1_170_b2_sep16_scaffold_92_26
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(22989..23690)
DNA (702bp) protein (234aa)
ABC-2 type transporter Tax=Thaumarchaeota archaeon N4 RepID=V6AVI6_9ARCH
ABC-2 type transporter {ECO:0000313|EMBL:CDI06523.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
ABC transporter
PLM3-1_170_b2_sep16_scaffold_92_27

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comp(23734..24675)
DNA (942bp) protein (314aa)
multidrug ABC transporter ATPase Tax=Nitrosopumilus sp. SJ RepID=UPI0003786145
Uncharacterized protein {ECO:0000313|EMBL:KKM64317.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC transporter related
PLM3-1_170_b2_sep16_scaffold_92_28
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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24750..26147
DNA (1398bp) protein (466aa)
OB-fold tRNA/helicase-type nucleic acid binding-protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
OB-fold tRNA/helicase-type nucleic acid binding-protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_92_29
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(26144..28657)
DNA (2514bp) protein (838aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
DEAD/DEAH box helicase
Tax=CSP1_1_Thaumarchaeota
Displaying items 1-30 of 39 in total

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