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PLM3-1_170_b2_sep16_scaffold_309

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_309_1
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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2..1384
DNA (1383bp) protein (461aa)
FAD linked oxidase domain protein Tax=Thaumarchaeota archaeon N4 RepID=V6AVU8_9ARCH
FAD linked oxidase domain protein {ECO:0000313|EMBL:CDI06705.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
FAD linked oxidase domain-containing protein
PLM3-1_170_b2_sep16_scaffold_309_2
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1410..1736)
DNA (327bp) protein (109aa)
tRNA-binding domain-containing protein
tRNA-binding domain-containing protein {ECO:0000313|EMBL:AJW71243.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
tRNA-binding domain-containing protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
PLM3-1_170_b2_sep16_scaffold_309_3
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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1800..2225
DNA (426bp) protein (142aa)
Cyclase/dehydrase Tax=Thaumarchaeota archaeon N4 RepID=V6AS44_9ARCH
Cyclase/dehydrase {ECO:0000313|EMBL:CDI05355.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
cyclase/dehydrase
PLM3-1_170_b2_sep16_scaffold_309_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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2232..3440
DNA (1209bp) protein (403aa)
glycosyl transferase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
glycosyl transferase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_309_5
Marine Group I thaumarchaeote SCGC RSA3, Thaumarchaeota, Archaea

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3477..4634
DNA (1158bp) protein (386aa)
Putative periplasmic serine endoprotease DegP protein {ECO:0000313|EMBL:KFM18692.1}; EC=3.4.21.107 {ECO:0000313|EMBL:KFM18692.1};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC RSA3.;"
2-alkenal reductase Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A361_NITMS
2-alkenal reductase
PLM3-1_170_b2_sep16_scaffold_309_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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4673..5842
DNA (1170bp) protein (390aa)
radical SAM protein; K11780 FO synthase subunit 1 [EC:2.5.1.77] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
cofG; FO synthase subunit 1 (EC:2.5.1.77)
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_309_7
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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5839..7101
DNA (1263bp) protein (421aa)
FO synthase subunit 2 {ECO:0000313|EMBL:CDI05351.1}; EC=2.5.1.- {ECO:0000313|EMBL:CDI05351.1};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
FO synthase subunit 2 Tax=Thaumarchaeota archaeon N4 RepID=V6ARI3_9ARCH
radical SAM protein
PLM3-1_170_b2_sep16_scaffold_309_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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7102..8460
DNA (1359bp) protein (453aa)
peptidase U62 modulator of DNA gyrase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
peptidase U62 modulator of DNA gyrase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_309_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8457..9440)
DNA (984bp) protein (328aa)
Calcium/cation antiporter family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFA5_NITGG
Ca2+/Na+ antiporter
Ca2+/Na+ antiporter {ECO:0000313|EMBL:AIF84077.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_309_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9509..9805)
DNA (297bp) protein (99aa)
Putative transcriptional regulator, AsnC family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIK9_NITGG
putative transcriptional regulator, AsnC family
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:AIC17200.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_309_11
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(10268..10636)
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AST0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05771.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_309_12

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10795..11817
DNA (1023bp) protein (341aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-D11.;"
Phosphoribosylformylglycinamidine cyclo-ligase Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EJ09_9ARCH
phosphoribosylformylglycinamidine cyclo-ligase
PLM3-1_170_b2_sep16_scaffold_309_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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11898..13484
DNA (1587bp) protein (529aa)
ELP3 family histone acetyltransferase (EC:2.3.1.48); K07739 elongator complex protein 3 [EC:2.3.1.48] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
ELP3 family histone acetyltransferase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_309_14
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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13484..15070
DNA (1587bp) protein (529aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
lysS; Lysine--tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CVM6_9ARCH
PLM3-1_170_b2_sep16_scaffold_309_15
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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15073..15270
DNA (198bp) protein (66aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6ARQ9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05342.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_309_16
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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15368..16048
DNA (681bp) protein (227aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6ARH2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05341.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
ATPase involved in DNA repair
PLM3-1_170_b2_sep16_scaffold_309_17

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16073..16378
DNA (306bp) protein (102aa)
Uncharacterized protein Tax=uncultured crenarchaeote 4B7 RepID=Q977R5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIE99817.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_11_F08.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_309_18
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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16426..17070
DNA (645bp) protein (215aa)
Nitroreductase family protein Tax=Thaumarchaeota archaeon N4 RepID=V6AV45_9ARCH
Nitroreductase family protein {ECO:0000313|EMBL:CDI06407.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
nitroreductase family protein
PLM3-1_170_b2_sep16_scaffold_309_19
unknown

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17108..17266
DNA (159bp) protein (53aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_309_20
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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17288..17704
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AV04_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06308.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_309_21
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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17779..18168
DNA (390bp) protein (130aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_309_22
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(18176..18733)
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CX70_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGP93872.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
PLM3-1_170_b2_sep16_scaffold_309_23
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(18746..20095)
DNA (1350bp) protein (450aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AS82_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05395.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
PLM3-1_170_b2_sep16_scaffold_309_24
unknown

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comp(20313..20657)
DNA (345bp) protein (115aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_309_25
GWA2_OD1_45_9, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(20662..21234)
DNA (573bp) protein (191aa)
Nuclear protein SET Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVW1_9EURY
Nuclear protein SET {ECO:0000313|EMBL:KKU15572.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_9.;"
nuclear protein SET
PLM3-1_170_b2_sep16_scaffold_309_26
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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21373..21663
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIE2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84521.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_309_27
unknown

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comp(21775..22125)
DNA (351bp) protein (117aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_309_28
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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comp(22343..22891)
DNA (549bp) protein (183aa)
hypothetical protein
Tax=RBG_13_Bathyarchaeota_52_12_curated
PLM3-1_170_b2_sep16_scaffold_309_29
AR13, Pacearchaeaota, DPANN, Archaea

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23304..24566
DNA (1263bp) protein (421aa)
Putative uncharacterized protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=AR13
PLM3-1_170_b2_sep16_scaffold_309_30
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(24864..25169)
DNA (306bp) protein (102aa)
Putative transcriptional regulator Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B7Y7_9ARCH
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AIF84129.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Displaying items 1-30 of 32 in total

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