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PLM3-1_170_b2_sep16_scaffold_671

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_671_1
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(140..385)
DNA (246bp) protein (82aa)
Transcriptional regulator Tax=Thaumarchaeota archaeon N4 RepID=V6ASM9_9ARCH
Transcriptional regulator {ECO:0000313|EMBL:CDI05545.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
transcriptional regulator, AsnC family
PLM3-1_170_b2_sep16_scaffold_671_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(388..1824)
DNA (1437bp) protein (479aa)
class II glutamine amidotransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Amidophosphoribosyltransferase (EC:2.4.2.14)
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_671_3
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1817..3985)
DNA (2169bp) protein (723aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
Phosphoribosylformylglycinamidine synthase 2 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CWH4_9ARCH
phosphoribosylformylglycinamidine synthase II
PLM3-1_170_b2_sep16_scaffold_671_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3982..4662)
DNA (681bp) protein (227aa)
purQ; Phosphoribosylformylglycinamidine synthase 1 (EC:6.3.5.3)
phosphoribosylformylglycinamidine synthase I bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_671_5
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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4701..5180
DNA (480bp) protein (160aa)
Putative signal transduction protein with CBS domains Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5G3_NITMS
signal transduction protein
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:ABX12674.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SCM1).;"
PLM3-1_170_b2_sep16_scaffold_671_6

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comp(5177..5437)
DNA (261bp) protein (87aa)
Phosphoribosylformylglycinamidine synthase PurS (PurL) {ECO:0000313|EMBL:AIF25618.1}; EC=6.3.5.3 {ECO:0000313|EMBL:AIF25618.1};; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT1000_52_H09.;"
Phosphoribosylformylglycinamidine synthase, purS Tax=Thaumarchaeota archaeon N4 RepID=V6ASM4_9ARCH
Phosphoribosylformylglycinamidine synthase PurS
PLM3-1_170_b2_sep16_scaffold_671_trna_1
unknown

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5520..5594
DNA (75bp)
transferRNA Thr
PLM3-1_170_b2_sep16_scaffold_671_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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5642..5881
DNA (240bp) protein (80aa)
AsnC/Lrp family regulatory protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
transcriptional regulator, AsnC family
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_671_8
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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5910..6197
DNA (288bp) protein (96aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6ATF3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05927.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_671_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6240..6749
DNA (510bp) protein (170aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
conserved exported protein of unknown function
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_671_10

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6786..7529
DNA (744bp) protein (248aa)
hypothetical protein Tax=Nitrosopumilus RepID=UPI00036800FA
Uncharacterized protein {ECO:0000313|EMBL:AIF15819.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_71_E12.;"
PF11906 family protein
PLM3-1_170_b2_sep16_scaffold_671_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7506..7961)
DNA (456bp) protein (152aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_671_12
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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8220..8504
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B9T8_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS81231.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
PLM3-1_170_b2_sep16_scaffold_671_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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8544..8867
DNA (324bp) protein (108aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_671_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(8864..10897)
DNA (2034bp) protein (678aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_671_15
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(11111..11359)
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B4Y3_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS81238.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
PLM3-1_170_b2_sep16_scaffold_671_16
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(11518..11760)
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYG9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGP94131.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_671_17
unknown

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comp(11814..12098)
DNA (285bp) protein (95aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_671_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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12204..12659
DNA (456bp) protein (152aa)
endoribonuclease L-PSP bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Endoribonuclease L-PSP
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_671_19
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(12683..13525)
DNA (843bp) protein (281aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
Probable endonuclease 4 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CXL2_9ARCH
apurinic endonuclease Apn1
PLM3-1_170_b2_sep16_scaffold_671_20
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13758..14738)
DNA (981bp) protein (327aa)
Phosphoesterase DHHA1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KJW8_9ARCH
Phosphoesterase DHHA1 {ECO:0000313|EMBL:EGG42332.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
phosphoesterase DHHA1
PLM3-1_170_b2_sep16_scaffold_671_21
unknown

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comp(14768..15058)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_671_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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15144..16310
DNA (1167bp) protein (389aa)
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
2-methylcitrate synthase/citrate synthase II
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_671_23
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(16307..16513)
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D2A7_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJW70533.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
PLM3-1_170_b2_sep16_scaffold_671_24
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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17150..18442
DNA (1293bp) protein (431aa)
Multicopper oxidase type 3 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BFN5_9ARCH
multicopper oxidase type 3
Multicopper oxidase type 3 {ECO:0000313|EMBL:AFS83131.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.;"
PLM3-1_170_b2_sep16_scaffold_671_25
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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18684..19070
DNA (387bp) protein (129aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_671_26
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(19059..20345)
DNA (1287bp) protein (429aa)
hydroxypyruvate reductase (EC:1.1.1.81); K00050 hydroxypyruvate reductase [EC:1.1.1.81] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hydroxypyruvate reductase (EC:1.1.1.81)
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_671_27
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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20416..21360
DNA (945bp) protein (315aa)
alcohol dehydrogenase, iron-dependent (EC:1.1.1.1)
Iron-containing alcohol dehydrogenase Tax=Thaumarchaeota archaeon N4 RepID=V6ATF7_9ARCH
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:CDI05864.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
PLM3-1_170_b2_sep16_scaffold_671_28
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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21475..22560
DNA (1086bp) protein (362aa)
Putative Luciferase-like monooxygenase Tax=Thaumarchaeota archaeon N4 RepID=V6ATK8_9ARCH
luciferase-like monooxygenase
Luciferase-like monooxygenase {ECO:0000313|EMBL:AJA92145.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
PLM3-1_170_b2_sep16_scaffold_671_29
uncultured marine crenarchaeote HF4000_ANIW93J19, Nitrosopumilales, Thaumarchaeota, Archaea

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22600..23499
DNA (900bp) protein (300aa)
Putative uncharacterized protein Tax=uncultured marine crenarchaeote HF4000_ANIW93J19 RepID=B3T328_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ06987.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000_ANIW93J19.;"
hypothetical protein
Displaying items 1-30 of 44 in total

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