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PLM3-1_170_b2_sep16_scaffold_1186

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1186_1
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(248..1102)
DNA (855bp) protein (285aa)
Putative Inosine-5'-monophosphate dehydrogenase related protein II Tax=Thaumarchaeota archaeon N4 RepID=V6AUY5_9ARCH
Putative Inosine-5'-monophosphate dehydrogenase related protein II {ECO:0000313|EMBL:CDI06370.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1186_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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1218..1763
DNA (546bp) protein (182aa)
CBS and zinc finger C2H2 domain-containing protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
CBS and zinc finger C2H2 domain-containing protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1186_3
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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1790..2374
DNA (585bp) protein (195aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AUZ2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06364.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1186_4
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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2482..2961
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KLF2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGG41808.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
Pyridoxamine 5'-phosphate oxidase family protein
PLM3-1_170_b2_sep16_scaffold_1186_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2947..4356)
DNA (1410bp) protein (470aa)
gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
glutamyl-tRNA(Gln) amidotransferase subunit B bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1186_6
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4353..5798)
DNA (1446bp) protein (482aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.7)
Glutamyl-tRNA(Gln) amidotransferase subunit A Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EWK0_9ARCH
PLM3-1_170_b2_sep16_scaffold_1186_7

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comp(5800..6066)
DNA (267bp) protein (89aa)
hypothetical protein; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (GatC) {ECO:0000313|EMBL:AIE98485.1}; EC=6.3.5.6 {ECO:0000313|EMBL:AIE98485.1};; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_05_H05.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1186_8
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(6075..7385)
DNA (1311bp) protein (437aa)
Putative Aspartyl-tRNA synthetase {ECO:0000313|EMBL:CDI05637.1}; EC=6.1.1.12 {ECO:0000313|EMBL:CDI05637.1};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Putative Aspartyl-tRNA synthetase Tax=Thaumarchaeota archaeon N4 RepID=V6ASQ2_9ARCH
aspartyl-tRNA synthetase
PLM3-1_170_b2_sep16_scaffold_1186_9
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(7667..7858)
DNA (192bp) protein (64aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AR21_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI04863.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1186_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7870..8280)
DNA (411bp) protein (137aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1186_11
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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8460..8666
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E737_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA06538.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1186_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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8718..9743
DNA (1026bp) protein (342aa)
purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase (EC:6.3.4.-) bin=bin2_Thaum tax=bin2_Thaum organism_group=Archaeon
purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase (EC:6.3.4.-)
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1186_13

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comp(9755..10606)
DNA (852bp) protein (284aa)
hypothetical protein Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00035DAA5B
Uncharacterized protein {ECO:0000313|EMBL:AKA49167.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
putative divalent heavy-metal cations transporter
PLM3-1_170_b2_sep16_scaffold_1186_14
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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10751..11080
DNA (330bp) protein (110aa)
Sugar-specific transcriptional regulator TrmB (Fragment) Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2ETQ2_9ARCH
Sugar-specific transcriptional regulator TrmB {ECO:0000313|EMBL:EPA05714.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
transcriptional regulator
PLM3-1_170_b2_sep16_scaffold_1186_15

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comp(11204..11878)
DNA (675bp) protein (225aa)
Putative uncharacterized protein Tax=uncultured marine crenarchaeote HF4000_APKG8D6 RepID=B3TA81_9ARCH
CbtA domain-containing protein {ECO:0000313|EMBL:AIF24035.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT1000_23_E11.;"
CbtA domain containing protein
PLM3-1_170_b2_sep16_scaffold_1186_16

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comp(11945..12166)
DNA (222bp) protein (74aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B6Z4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF06595.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_193_D11.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1186_17
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(12228..12704)
DNA (477bp) protein (159aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B608_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS80879.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
PLM3-1_170_b2_sep16_scaffold_1186_18
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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13011..13568
DNA (558bp) protein (186aa)
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:AJM92527.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
DSBA oxidoreductase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
PLM3-1_170_b2_sep16_scaffold_1186_19
unknown

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13637..13879
DNA (243bp) protein (81aa)

This feature has no annotations

Displaying 19 items

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