ggKbase home page

PLM3-1_170_b2_sep16_scaffold_5597

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_5597_1
RLO_OD1_Nomurabacteria_44_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(273..683)
DNA (411bp) protein (137aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00037CF883
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_44_11_curated
PLM3-1_170_b2_sep16_scaffold_5597_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

976..1434
DNA (459bp) protein (153aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_5597_3
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(1447..2286)
DNA (840bp) protein (280aa)
Restriction endonuclease Tax=Thaumarchaeota archaeon N4 RepID=V6AUZ9_9ARCH
Restriction endonuclease {ECO:0000313|EMBL:CDI06390.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
restriction endonuclease
PLM3-1_170_b2_sep16_scaffold_5597_4
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(2320..2769)
DNA (450bp) protein (150aa)
Putative signal-transduction protein with CBS domains Tax=Thaumarchaeota archaeon N4 RepID=V6AUZ0_9ARCH
Putative signal-transduction protein with CBS domains {ECO:0000313|EMBL:CDI06375.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
signal-transduction protein
PLM3-1_170_b2_sep16_scaffold_5597_5
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

2955..3752
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AU78_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA04326.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_5597_6
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3760..4431)
DNA (672bp) protein (224aa)
Phosphoribosyltransferase Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKQ7_DESK7
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:AEG17036.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
PLM3-1_170_b2_sep16_scaffold_5597_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(4418..5314)
DNA (897bp) protein (299aa)
hypothetical protein Tax=Chlorogloeopsis RepID=UPI0003029873
phosphoribosyl transferase
Putative phosphoribosyl transferase {ECO:0000313|EMBL:AFU58143.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_5597_8
unknown

Not on your lists

comp(5324..5587)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_5597_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(5754..5975)
DNA (222bp) protein (74aa)
id=14428390 bin=bin2_Thaum tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_5597_10
unknown

Not on your lists

6167..6307
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying 10 items

View Taxonomy