ggKbase home page

PLM3-1_170_b2_sep16_scaffold_18327

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_18327_1

Not on your lists

3..431
DNA (429bp) protein (143aa)
hypothetical protein Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI000373C8EA
Uncharacterized protein {ECO:0000313|EMBL:AIF00048.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_128_G11.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_18327_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

435..1634
DNA (1200bp) protein (400aa)
tRNA pseudouridine synthase TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
tRNA pseudouridine synthase TruD
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_18327_3

Not on your lists

1714..1944
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL28605.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AsnC family transcriptional regulator bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
AsnC family transcriptional regulator
PLM3-1_170_b2_sep16_scaffold_18327_4

Not on your lists

comp(1922..2140)
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL28604.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_18327_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

2220..2936
DNA (717bp) protein (239aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
conserved membrane protein of unknown function
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_18327_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(2933..3370)
DNA (438bp) protein (146aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
conserved exported protein of unknown function
Tax=CSP1_1_Thaumarchaeota
Displaying 6 items

View Taxonomy